RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ATP8B3O60423 1300 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 TEX28O15482 410 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 TPM1P09493 284 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 UCHL3P15374 230 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 NDST1P52848 882 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 ARPP19P56211 112 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 GPR17Q13304 367 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 ZNF461Q8TAF7 563 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 HDAC7Q8WUI4 952 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 SPAG5Q96R06 1193 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 SYT15Q9BQS2 421 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 CLSTN3Q9BQT9 956 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 EDEM3Q9BZQ6 932 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 XPO4Q9C0E2 1151 aaKnown RBP21.41■■□□□ 1.02
USP53-203ENST00000507597 FAM207AQ9NSI2 230 aaPredicted RBP21.41■■□□□ 1.02
USP53-203ENST00000507597 SIK3Q9Y2K2 1263 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 MTCH2Q9Y6C9 303 aa21.41■■□□□ 1.02
USP53-203ENST00000507597 HIDE1A8MVS5 230 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 TEX33O43247 280 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 LRRN2O75325 713 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 CILPO75339 1184 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 GLUD1P00367 558 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 PDGFRBP09619 1106 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 CCDC172P0C7W6 258 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 RAP1GAPP47736 663 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 BPIFB4P59827 614 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 ARHGAP44Q17R89 818 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 INTS6LQ5JSJ4 861 aaKnown RBP21.4■■□□□ 1.02
USP53-203ENST00000507597 ARHGEF19Q8IW93 802 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 CRYBG2Q8N1P7 616 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 ZNF397Q8NF99 534 aaPredicted RBP21.4■■□□□ 1.02
USP53-203ENST00000507597 TMEM176AQ96HP8 235 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 CDX2Q99626 313 aaPredicted RBP21.4■■□□□ 1.02
USP53-203ENST00000507597 STK33Q9BYT3 514 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 ZCWPW1Q9H0M4 648 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 PLEKHA4Q9H4M7 779 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 AFF4Q9UHB7 1163 aaKnown RBP21.4■■□□□ 1.02
USP53-203ENST00000507597 PLXNA4Q9HCM2 1894 aa21.4■■□□□ 1.02
USP53-203ENST00000507597 FOSL2P15408 326 aa21.39■■□□□ 1.01
USP53-203ENST00000507597 PTPN1P18031 435 aaKnown RBP21.39■■□□□ 1.01
USP53-203ENST00000507597 RAPGEF1Q13905 1077 aa21.39■■□□□ 1.01
USP53-203ENST00000507597 DUSP6Q16828 381 aa21.39■■□□□ 1.01
USP53-203ENST00000507597 CCDC149Q6ZUS6 474 aa21.39■■□□□ 1.01
USP53-203ENST00000507597 B3GALNT2Q8NCR0 500 aa21.39■■□□□ 1.01
USP53-203ENST00000507597 SPPL2BQ8TCT7 592 aa21.39■■□□□ 1.01
USP53-203ENST00000507597 MTMR10Q9NXD2 777 aa21.39■■□□□ 1.01
USP53-203ENST00000507597 HSFX1Q9UBD0 423 aa21.39■■□□□ 1.01
USP53-203ENST00000507597 GOLGA6L3A6NEY3 463 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 SPDYE4A6NLX3 237 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 CLASP2O75122 1294 aaKnown RBP21.38■■□□□ 1.01
USP53-203ENST00000507597 PAEPP09466 180 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 KRT5P13647 590 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 NRIP1P48552 1158 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 TUFMP49411 452 aaKnown RBP21.38■■□□□ 1.01
USP53-203ENST00000507597 POLR2FP61218 127 aaKnown RBP21.38■■□□□ 1.01
USP53-203ENST00000507597 ROR1Q01973 937 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 TRIM14Q14142 442 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 STILQ15468 1287 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 FIGNQ5HY92 759 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 LIN9Q5TKA1 542 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 TMEM270Q6UE05 265 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 RBM23Q86U06 439 aaKnown RBP21.38■■□□□ 1.01
USP53-203ENST00000507597 OSTM1Q86WC4 334 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 PALB2Q86YC2 1186 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 SPATA2LQ8IUW3 424 aaPredicted RBP21.38■■□□□ 1.01
USP53-203ENST00000507597 GLYCTKQ8IVS8 523 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 MYCBPAPQ8TBZ2 947 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 CASP10Q92851 521 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 ELMO3Q96BJ8 720 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 FUBP3Q96I24 572 aaKnown RBP eCLIP21.38■■□□□ 1.01
USP53-203ENST00000507597 HEXIM2Q96MH2 286 aaKnown RBP21.38■■□□□ 1.01
USP53-203ENST00000507597 SDCBP2Q9H190 292 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 NUCKS1Q9H1E3 243 aaKnown RBP21.38■■□□□ 1.01
USP53-203ENST00000507597 SIX2Q9NPC8 291 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 CEP72Q9P209 647 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 PCDHB5Q9Y5E4 795 aa21.38■■□□□ 1.01
USP53-203ENST00000507597 ITIH6Q6UXX5 1313 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 ATF2P15336 505 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 RPL17P18621 184 aaKnown RBP21.37■■□□□ 1.01
USP53-203ENST00000507597 LMO2P25791 158 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 USP8P40818 1118 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 STAT1P42224 750 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 SLC8A3P57103 927 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 PTK2Q05397 1052 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 SLC39A12Q504Y0 691 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 TCEAL5Q5H9L2 206 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 IQCEQ6IPM2 695 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 Q7L0L9 218 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 OR10T2Q8NGX3 314 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 MYLIPQ8WY64 445 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 RTP3Q9BQQ7 232 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 DZANK1Q9NVP4 752 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 GTF3C4Q9UKN8 822 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 MYO6Q9UM54 1294 aa21.37■■□□□ 1.01
USP53-203ENST00000507597 MED7O43513 233 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 ABLIM3O94929 683 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 VDRP11473 427 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 ACAT1P24752 427 aaKnown RBP21.36■■□□□ 1.01
USP53-203ENST00000507597 CLCN4P51793 760 aa21.36■■□□□ 1.01
USP53-203ENST00000507597 PLD1Q13393 1074 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms