RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 STK38Q15208 465 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 ENOX2Q16206 610 aaKnown RBP8.67□□□□□ -1.02
SCN1A-207ENST00000507401 ZC2HC1CQ53FD0 456 aaPredicted RBP8.67□□□□□ -1.02
SCN1A-207ENST00000507401 ATL3Q6DD88 541 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 ADALQ6DHV7 355 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 SLC39A4Q6P5W5 647 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 SARM1Q6SZW1 724 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 DYMQ7RTS9 669 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 GRASPQ7Z6J2 395 aaPredicted RBP8.67□□□□□ -1.02
SCN1A-207ENST00000507401 FILIP1Q7Z7B0 1213 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 NT5DC4Q86YG4 428 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 SLC44A3Q8N4M1 653 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 SLC7A14Q8TBB6 771 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 FOXJ1Q92949 421 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 MYADMQ96S97 322 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 CUEDC2Q9H467 287 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 MRPL44Q9H9J2 332 aaKnown RBP8.67□□□□□ -1.02
SCN1A-207ENST00000507401 OLFML3Q9NRN5 406 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 FBXL5Q9UKA1 691 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 CDH7Q9ULB5 785 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 DUSP12Q9UNI6 340 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 EXOC7Q9UPT5 735 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 C2CD2Q9Y426 696 aa8.67□□□□□ -1.02
SCN1A-207ENST00000507401 ZDBF2Q9HCK1 2354 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 WDR27A2RRH5 827 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 ANKRD63C9JTQ0 380 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 PIRO00625 290 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 CUTAO60888 179 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 SLU7O95391 586 aaKnown RBP8.66□□□□□ -1.02
SCN1A-207ENST00000507401 YEATS4O95619 227 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 LDHAP00338 332 aaKnown RBP8.66□□□□□ -1.02
SCN1A-207ENST00000507401 IVLP07476 585 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 TYMPP19971 482 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 STAT6P42226 847 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 LILRA4P59901 499 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 AMPD3Q01432 767 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 ROR1Q01973 937 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 NHLH1Q02575 133 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 HTR4Q13639 388 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 CTXN3Q4LDR2 81 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 CEP135Q66GS9 1140 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 ZNF280DQ6N043 979 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 MTSS1LQ765P7 747 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 SFR1Q86XK3 245 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 BEST2Q8NFU1 509 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 ACCSQ96QU6 501 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 RASSF4Q9H2L5 321 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 TNMDQ9H2S6 317 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 TMEM206Q9H813 350 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 ATP13A2Q9NQ11 1180 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 KBTBD4Q9NVX7 518 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 GDE1Q9NZC3 331 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 TFIP11Q9UBB9 837 aaKnown RBP8.66□□□□□ -1.02
SCN1A-207ENST00000507401 TUBGCP4Q9UGJ1 667 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 AFF4Q9UHB7 1163 aaKnown RBP8.66□□□□□ -1.02
SCN1A-207ENST00000507401 AGO2Q9UKV8 859 aaKnown RBP8.66□□□□□ -1.02
SCN1A-207ENST00000507401 DOCK8Q8NF50 2099 aa8.66□□□□□ -1.02
SCN1A-207ENST00000507401 WDFY4Q6ZS81 3184 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 ANO9A1A5B4 782 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 OR6C75A6NL08 312 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 PRRG1O14668 218 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 ZNF197O14709 1029 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 KIAA0391O15091 583 aaKnown RBP8.65□□□□□ -1.02
SCN1A-207ENST00000507401 CCL16O15467 120 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 IL18RAPO95256 599 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 LRG1P02750 347 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 SRFP11831 508 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 GARTP22102 1010 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 ADSSP30520 456 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 ACOT2P49753 483 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 YWHAHQ04917 246 aaPredicted RBP8.65□□□□□ -1.02
SCN1A-207ENST00000507401 SPAG1Q07617 926 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 GPR17Q13304 367 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 TMEM132DQ14C87 1099 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 PABPC1LQ4VXU2 614 aaKnown RBP8.65□□□□□ -1.02
SCN1A-207ENST00000507401 ZBTB41Q5SVQ8 909 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 JADE1Q6IE81 842 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 CNNM4Q6P4Q7 775 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 CRELD2Q6UXH1 353 aaPredicted RBP8.65□□□□□ -1.02
SCN1A-207ENST00000507401 DSTYKQ6XUX3 929 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 USP37Q86T82 979 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 CCDC65Q8IXS2 484 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 IQUBQ8NA54 791 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 LEMD2Q8NC56 503 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 POMGNT1Q8WZA1 660 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 TSC1Q92574 1164 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 FGF13Q92913 245 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 MRFAP1L1Q96HT8 127 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 RTP3Q9BQQ7 232 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 TACO1Q9BSH4 297 aaKnown RBP8.65□□□□□ -1.02
SCN1A-207ENST00000507401 FAM107BQ9H098 131 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 MFSD1Q9H3U5 465 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 SMOC2Q9H3U7 446 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 CYP4F11Q9HBI6 524 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 SLC2A4RGQ9NR83 387 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 PANK4Q9NVE7 773 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 DNMT3BQ9UBC3 853 aaKnown RBP8.65□□□□□ -1.02
SCN1A-207ENST00000507401 HSFX1Q9UBD0 423 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 DSEQ9UL01 958 aa8.65□□□□□ -1.02
SCN1A-207ENST00000507401 CFAP45Q9UL16 551 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms