RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 GLIS1Q8NBF1 620 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 PHC3Q8NDX5 983 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 TCP10LQ8TDR4 215 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 SLITRK1Q96PX8 696 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 IP6K2Q9UHH9 426 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 DCTN4Q9UJW0 460 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 FAM155BO75949 473 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 ATP5BP06576 529 aaKnown RBP18.68■□□□□ 0.58
NUP54-205ENST00000507257 ESRRAP11474 423 aaPredicted RBP18.68■□□□□ 0.58
NUP54-205ENST00000507257 TAL1P17542 331 aaPredicted RBP18.68■□□□□ 0.58
NUP54-205ENST00000507257 STAT2P52630 851 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 C1QBPQ07021 282 aaKnown RBP18.68■□□□□ 0.58
NUP54-205ENST00000507257 CYP24A1Q07973 514 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 HIF1AQ16665 826 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 CCDC174Q6PII3 467 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 C15orf39Q6ZRI6 1047 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 RINLQ6ZS11 566 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 NET1Q7Z628 596 aaPredicted RBP18.68■□□□□ 0.58
NUP54-205ENST00000507257 SDCCAG8Q86SQ7 713 aaPredicted RBP18.68■□□□□ 0.58
NUP54-205ENST00000507257 CPA5Q8WXQ8 436 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 GBP5Q96PP8 586 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 FRMD8P1Q9BZ68 369 aaPredicted RBP18.68■□□□□ 0.58
NUP54-205ENST00000507257 C1orf112Q9NSG2 853 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 CCNL1Q9UK58 526 aaPredicted RBP18.68■□□□□ 0.58
NUP54-205ENST00000507257 MRPL11Q9Y3B7 192 aaKnown RBP18.68■□□□□ 0.58
NUP54-205ENST00000507257 GOLGA8IPA6NC78 632 aa18.67■□□□□ 0.58
NUP54-205ENST00000507257 DDTLA6NHG4 134 aaPredicted RBP18.67■□□□□ 0.58
NUP54-205ENST00000507257 GOLGA8JA6NMD2 632 aa18.67■□□□□ 0.58
NUP54-205ENST00000507257 SLURP2P0DP57 97 aa18.67■□□□□ 0.58
NUP54-205ENST00000507257 ECE1P42892 770 aa18.67■□□□□ 0.58
NUP54-205ENST00000507257 CIAPIN1Q6FI81 312 aa18.67■□□□□ 0.58
NUP54-205ENST00000507257 NLRX1Q86UT6 975 aa18.67■□□□□ 0.58
NUP54-205ENST00000507257 TMPRSS6Q8IU80 811 aa18.67■□□□□ 0.58
NUP54-205ENST00000507257 WDR60Q8WVS4 1066 aa18.67■□□□□ 0.58
NUP54-205ENST00000507257 CCDC127Q96BQ5 260 aa18.67■□□□□ 0.58
NUP54-205ENST00000507257 FAM118BQ9BPY3 351 aa18.67■□□□□ 0.58
NUP54-205ENST00000507257 TMEM120AQ9BXJ8 343 aa18.67■□□□□ 0.58
NUP54-205ENST00000507257 ASCC2Q9H1I8 757 aaPredicted RBP18.67■□□□□ 0.58
NUP54-205ENST00000507257 TBX20Q9UMR3 447 aa18.67■□□□□ 0.58
NUP54-205ENST00000507257 SNCAIPQ9Y6H5 919 aa18.67■□□□□ 0.58
NUP54-205ENST00000507257 A0A0G2JND7 137 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 KLRG2A4D1S0 409 aaPredicted RBP18.66■□□□□ 0.58
NUP54-205ENST00000507257 CD58P19256 250 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 SERPINB3P29508 390 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 PIK3CAP42336 1068 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 ETV4P43268 484 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 CRKP46108 304 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 SCNN1DP51172 638 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 NOMO3P69849 1222 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 ZBTB16Q05516 673 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 TRMT5Q32P41 509 aaKnown RBP18.66■□□□□ 0.58
NUP54-205ENST00000507257 FEZF2Q8TBJ5 459 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 PAFAH2Q99487 392 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 TBC1D30Q9Y2I9 924 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 DENND3A2RUS2 1198 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 GLRA2P23416 452 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 CRABP2P29373 138 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 QARSP47897 775 aaKnown RBP18.66■□□□□ 0.58
NUP54-205ENST00000507257 NEK3P51956 506 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 ARL4CP56559 192 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 SLC18A2Q05940 514 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 WDR72Q3MJ13 1102 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 SH3BP5LQ7L8J4 393 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 ADGRG6Q86SQ4 1221 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 SCYL3Q8IZE3 742 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 PDCD7Q8N8D1 485 aaKnown RBP18.66■□□□□ 0.58
NUP54-205ENST00000507257 CCDC110Q8TBZ0 833 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 DCAKDQ8WVC6 231 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 SENP7Q9BQF6 1050 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 GPAMQ9HCL2 828 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.66■□□□□ 0.58
NUP54-205ENST00000507257 PARVAQ9NVD7 372 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 FAM198AQ9UFP1 575 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 KCNG1Q9UIX4 513 aa18.66■□□□□ 0.58
NUP54-205ENST00000507257 COL2A1P02458 1487 aaPredicted RBP18.65■□□□□ 0.58
NUP54-205ENST00000507257 SLC16A4O15374 487 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 LYNP07948 512 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 ZSCAN5DPP0CG00 497 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 PIM1P11309 404 aaPredicted RBP18.65■□□□□ 0.58
NUP54-205ENST00000507257 PGM1P36871 562 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 POLE2P56282 527 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 PEX3P56589 373 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 CLDN10P78369 228 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 LAMB3Q13751 1172 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 PPIL6Q8IXY8 311 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 ABRAQ8N0Z2 381 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 TMEM161BQ8NDZ6 487 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 SLC35B2Q8TB61 432 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 PYROXD1Q8WU10 500 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 OXNAD1Q96HP4 312 aaPredicted RBP18.65■□□□□ 0.58
NUP54-205ENST00000507257 VCX3BQ9H321 246 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 VCX3AQ9NNX9 186 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 ARHGEF4Q9NR80 690 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 CNTN3Q9P232 1028 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 EFR3BQ9Y2G0 817 aa18.65■□□□□ 0.58
NUP54-205ENST00000507257 TLR3O15455 904 aaKnown RBP18.64■□□□□ 0.58
NUP54-205ENST00000507257 DHX15O43143 795 aaKnown RBP18.64■□□□□ 0.58
NUP54-205ENST00000507257 PLA2G6O60733 806 aa18.64■□□□□ 0.58
NUP54-205ENST00000507257 DSG3P32926 999 aa18.64■□□□□ 0.58
NUP54-205ENST00000507257 OVGP1Q12889 678 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms