RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ARID3AQ99856 593 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 RBSNQ9H1K0 784 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 SNX25Q9H3E2 840 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 SIK3Q9Y2K2 1263 aa13.73□□□□□ -0.21
TCOF1-210ENST00000506767 FSD2A1L4K1 749 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 TEX33O43247 280 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 TGM5O43548 720 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 CILPO75339 1184 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 CLSTN1O94985 981 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 OR4Q2P0C623 313 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 ACAT1P24752 427 aaKnown RBP13.72□□□□□ -0.21
TCOF1-210ENST00000506767 PCSK1P29120 753 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 APBA1Q02410 837 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 UBXN1Q04323 297 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 GPR17Q13304 367 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 ADAM15Q13444 863 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 CTC1Q2NKJ3 1217 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 INTS6LQ5JSJ4 861 aaKnown RBP13.72□□□□□ -0.21
TCOF1-210ENST00000506767 SMYD5Q6GMV2 418 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 FAM171BQ6P995 826 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 TMEM184AQ6ZMB5 413 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 LRRTM3Q86VH5 581 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 GLYCTKQ8IVS8 523 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 TTC39CQ8N584 583 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 EFHBQ8N7U6 833 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 ZNF461Q8TAF7 563 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 KAT5Q92993 513 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 JAKMIP2Q96AA8 810 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 FAM81BQ96LP2 452 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 KREMEN1Q96MU8 473 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 PLCB1Q9NQ66 1216 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 CISHQ9NSE2 258 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 APEX2Q9UBZ4 518 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 CDH9Q9ULB4 789 aa13.72□□□□□ -0.21
TCOF1-210ENST00000506767 BARX2Q9UMQ3 279 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-210ENST00000506767 MTCL1Q9Y4B5 1905 aaKnown RBP13.72□□□□□ -0.21
TCOF1-210ENST00000506767 PRRC2BQ5JSZ5 2229 aaKnown RBP13.71□□□□□ -0.21
TCOF1-210ENST00000506767 A8MXQ7 604 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 NCK2O43639 380 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 VNN2O95498 520 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 GLP2RO95838 553 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 SERPINC1P01008 464 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 PDGFRBP09619 1106 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 ACO1P21399 889 aaKnown RBP13.71□□□□□ -0.21
TCOF1-210ENST00000506767 NDST1P52848 882 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 SMARCB1Q12824 385 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 FILIP1LQ4L180 1135 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 KLHDC7AQ5VTJ3 777 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 TPGS2Q68CL5 300 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 GJB7Q6PEY0 223 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 RNF19BQ6ZMZ0 732 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 RRAGAQ7L523 313 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 ENOSF1Q7L5Y1 443 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 PALB2Q86YC2 1186 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 DCP1BQ8IZD4 617 aaKnown RBP13.71□□□□□ -0.21
TCOF1-210ENST00000506767 CRYBG2Q8N1P7 616 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 PPM1KQ8N3J5 372 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 VN1R2Q8NFZ6 395 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 HDAC7Q8WUI4 952 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 TWNKQ96RR1 684 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 SYT15Q9BQS2 421 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 NAA15Q9BXJ9 866 aaKnown RBP13.71□□□□□ -0.21
TCOF1-210ENST00000506767 DPEP3Q9H4B8 488 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 UBE2TQ9NPD8 197 aaPredicted RBP13.71□□□□□ -0.21
TCOF1-210ENST00000506767 CRTAC1Q9NQ79 661 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 TMLHEQ9NVH6 421 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 AFF4Q9UHB7 1163 aaKnown RBP13.71□□□□□ -0.21
TCOF1-210ENST00000506767 MAFFQ9ULX9 164 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 CNTN6Q9UQ52 1028 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 HCFC2Q9Y5Z7 792 aa13.71□□□□□ -0.21
TCOF1-210ENST00000506767 MYO7AQ13402 2215 aa13.71□□□□□ -0.22
TCOF1-210ENST00000506767 MYBPHLA2RUH7 354 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 LINC01565O15544 149 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 ATP2C2O75185 946 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 NOL4O94818 638 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 GLUD1P00367 558 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 CPB1P15086 417 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 ATF2P15336 505 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 EPCAMP16422 314 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 PTPN1P18031 435 aaKnown RBP13.7□□□□□ -0.22
TCOF1-210ENST00000506767 CD58P19256 250 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 KLK7P49862 253 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 MFAP3P55082 362 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 ARPP19P56211 112 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 UBASH3AP57075 661 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 YWHAEP62258 255 aaKnown RBP13.7□□□□□ -0.22
TCOF1-210ENST00000506767 RBM10P98175 930 aaKnown RBP13.7□□□□□ -0.22
TCOF1-210ENST00000506767 TSPY1Q01534 308 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 SYCP1Q15431 976 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 SLC39A12Q504Y0 691 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 PPM1EQ8WY54 764 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 LSM14BQ9BX40 385 aaKnown RBP13.7□□□□□ -0.22
TCOF1-210ENST00000506767 GANQ9H2C0 597 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 IGFLR1Q9H665 355 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 HMGXB4Q9UGU5 601 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 FBXW11Q9UKB1 542 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 AJAP1Q9UKB5 411 aaPredicted RBP13.7□□□□□ -0.22
TCOF1-210ENST00000506767 GTF3C4Q9UKN8 822 aa13.7□□□□□ -0.22
TCOF1-210ENST00000506767 A0A1W2PQC6 194 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 MTMR11A4FU01 709 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms