RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 NOP14P78316 857 aaKnown RBP17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 CDC16Q13042 620 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 ALCAMQ13740 583 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 HNRNPDQ14103 355 aaKnown RBP17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 TRMT5Q32P41 509 aaKnown RBP17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 LLGL2Q6P1M3 1020 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 RFX8Q6ZV50 586 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 TRIM11Q96F44 468 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 ACCSQ96QU6 501 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 PANX3Q96QZ0 392 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 POLIQ9UNA4 740 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 SHOC2Q9UQ13 582 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 ATP2A1O14983 1001 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 RNASEH1O60930 286 aaKnown RBP17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 MAPTP10636 758 aaKnown RBP17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 CD58P19256 250 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 EFTUD2Q15029 972 aaKnown RBP eCLIP17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 RIPOR1Q6ZS17 1223 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 PHLDB2Q86SQ0 1253 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 NMUR2Q9GZQ4 415 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 NDE1Q9NXR1 346 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 PLA2G4CQ9UP65 541 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 MYPNQ86TC9 1320 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 CAPN14A8MX76 684 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 B2RBV5 119 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 MYL2P10916 166 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 PIM1P11309 404 aaPredicted RBP17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 EEF2P13639 858 aaKnown RBP17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 TAL1P17542 331 aaPredicted RBP17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 SH3BGRP55822 239 aaPredicted RBP17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 AP2B1P63010 937 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 KRT39Q6A163 491 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 DPY19L2Q6NUT2 758 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 NT5C1BQ96P26 610 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 PAFAH2Q99487 392 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 ALG13Q9NP73 1137 aaKnown RBP17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 ARMCX1Q9P291 453 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 ZNF148Q9UQR1 794 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 SUGT1Q9Y2Z0 365 aa17.98■□□□□ 0.47
SQSTM1-211ENST00000506690 ARHGEF35A5YM69 484 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 C2orf71A6NGG8 1288 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 TM7SF2O76062 418 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 UFL1O94874 794 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 CALCAP01258 141 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 ETV4P43268 484 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 ACAD11Q709F0 780 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 LCA5Q86VQ0 697 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 SCUBE1Q8IWY4 988 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 ST13P4Q8IZP2 240 aaPredicted RBP17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 FBXO27Q8NI29 283 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 CPA5Q8WXQ8 436 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 CCDC17Q96LX7 622 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 DENND3A2RUS2 1198 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 H3BRJ5 948 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 GOLGA8RI6L899 631 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 BUD23O43709 281 aaKnown RBP17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 BANF1O75531 89 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 GLRA2P23416 452 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 NFX1Q12986 1120 aaKnown RBP17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 TFDP1Q14186 410 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 ANKMY2Q8IV38 441 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 RBM15BQ8NDT2 890 aaKnown RBP17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 MIS12Q9H081 205 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 ACSS3Q9H6R3 686 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 GPAMQ9HCL2 828 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 ZDHHC7Q9NXF8 308 aa17.97■□□□□ 0.47
SQSTM1-211ENST00000506690 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 GAS7O60861 476 aa17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 SLURP2P0DP57 97 aa17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 PHBP35232 272 aa17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 CPA2P48052 419 aa17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 USP4Q13107 963 aa17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 MYBPC3Q14896 1274 aa17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 C2CD6Q53TS8 623 aa17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 TRIM74Q86UV6 250 aa17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 TRIM73Q86UV7 250 aa17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 DCAKDQ8WVC6 231 aa17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 LXNQ9BS40 222 aa17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 TMEM8AQ9HCN3 771 aa17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 NYAP2Q9P242 653 aa17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 DRG1Q9Y295 367 aaKnown RBP17.96■□□□□ 0.47
SQSTM1-211ENST00000506690 SPATA31D3P0C874 917 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 ETS2P15036 469 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 SSTR1P30872 391 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 MAP3K10Q02779 954 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 TMCO4Q5TGY1 634 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 PADI6Q6TGC4 694 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 SPATA31D4Q6ZUB0 917 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 MON1BQ7L1V2 547 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 NLRX1Q86UT6 975 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 TREML1Q86YW5 311 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 ULK2Q8IYT8 1036 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 NAT14Q8WUY8 206 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 KLF6Q99612 283 aaPredicted RBP17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 SLC7A8Q9UHI5 535 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 PPM1HQ9ULR3 514 aa17.96■□□□□ 0.46
SQSTM1-211ENST00000506690 GOLGA8IPA6NC78 632 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 GOLGA8JA6NMD2 632 aa17.95■□□□□ 0.46
SQSTM1-211ENST00000506690 NDC80O14777 642 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms