RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 KCND2Q9NZV8 630 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 DNM3Q9UQ16 869 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 NFS1Q9Y697 457 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 ZSCAN5CA6NGD5 496 aaPredicted RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 N4BP3O15049 544 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 SNX2O60749 519 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 N4BP1O75113 896 aaKnown RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 SNAI1O95863 264 aaPredicted RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 ARAFP10398 606 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 BPIP17213 487 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 GLRA2P23416 452 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 UTP14CQ5TAP6 766 aaKnown RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 LLGL2Q6P1M3 1020 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 CYP26C1Q6V0L0 522 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 NXPE1Q8N323 547 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 RASGEF1CQ8N431 466 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 ERO1AQ96HE7 468 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 MS4A14Q96JA4 679 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 FAM207AQ9NSI2 230 aaPredicted RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 RABGAP1Q9Y3P9 1069 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 UBE4BO95155 1302 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 MAPK13O15264 365 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 SIAH2O43255 324 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 PCDHGA12O60330 932 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 GJB1P08034 283 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 TRIM49P0CI25 452 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 TRIM49CP0CI26 452 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 PLS3P13797 630 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 HMGB2P26583 209 aaKnown RBP6.36□□□□□ -1.39
SCLT1-207ENST00000506233 ADCYAP1R1P41586 468 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 ARHGAP29Q52LW3 1261 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 TJAP1Q5JTD0 557 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 CBWD2Q8IUF1 395 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 TMTC1Q8IUR5 882 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 CNGA4Q8IV77 575 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 ARFGAP1Q8N6T3 406 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 WNT2BQ93097 391 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 HES6Q96HZ4 224 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 ZBTB45Q96K62 511 aaPredicted RBP6.36□□□□□ -1.39
SCLT1-207ENST00000506233 SERINC2Q96SA4 455 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 GPR20Q99678 358 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 TM9SF2Q99805 663 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 C16orf70Q9BSU1 422 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 GLT8D2Q9H1C3 349 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 ERVK-5Q9HDB9 667 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 SUSD2Q9UGT4 822 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 NDOR1Q9UHB4 597 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 DACH1Q9UI36 760 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 CYTH4Q9UIA0 394 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 NAGPAQ9UK23 515 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 HCN2Q9UL51 889 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 PCDHGA9Q9Y5G4 932 aaKnown RBP6.36□□□□□ -1.39
SCLT1-207ENST00000506233 PCDHGA8Q9Y5G5 932 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 PCDHGA7Q9Y5G6 932 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 PCDHGA6Q9Y5G7 932 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 PCDHGA3Q9Y5H0 932 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 PCDHGA2Q9Y5H1 932 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 UNGP13051 313 aaPredicted RBP6.36□□□□□ -1.39
SCLT1-207ENST00000506233 VAV2P52735 878 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 PPP2R3AQ06190 1150 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 ADAM9Q13443 819 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 SF1Q15637 639 aaKnown RBP6.36□□□□□ -1.39
SCLT1-207ENST00000506233 SLC18A3Q16572 532 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 LY6KQ17RY6 165 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 PLA2G4EQ3MJ16 856 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 HAUS3Q68CZ6 603 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 AADACL2Q6P093 401 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 WDR93Q6P2C0 686 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 CCDC170Q8IYT3 715 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 CCDC89Q8N998 374 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 SCFD2Q8WU76 684 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 TMEM40Q8WWA1 233 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 POMGNT1Q8WZA1 660 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 TRIM47Q96LD4 638 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 CRACR2AQ9BSW2 395 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 EDEM3Q9BZQ6 932 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 ASCC2Q9H1I8 757 aaPredicted RBP6.36□□□□□ -1.39
SCLT1-207ENST00000506233 MRPL11Q9Y3B7 192 aaKnown RBP6.36□□□□□ -1.39
SCLT1-207ENST00000506233 LTBP2Q14767 1821 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 PSMA7O14818 248 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 CHMP2AO43633 222 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 MOCS3O95396 460 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 CAPNS1P04632 268 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 IMPDH2P12268 514 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 PRLRP16471 622 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 NR2F2P24468 414 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 FMO5P49326 533 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 RTP1P59025 263 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 FMO1Q01740 532 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 ARHGAP1Q07960 439 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 SNRNP48Q6IEG0 339 aaKnown RBP6.36□□□□□ -1.39
SCLT1-207ENST00000506233 NFRKBQ6P4R8 1299 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 FAM71AQ8IYT1 594 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 PPHLN1Q8NEY8 458 aaKnown RBP6.36□□□□□ -1.39
SCLT1-207ENST00000506233 AENQ8WTP8 325 aaKnown RBP6.36□□□□□ -1.39
SCLT1-207ENST00000506233 CHURC1Q8WUH1 139 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 COPS5Q92905 334 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 CEP44Q9C0F1 390 aa6.36□□□□□ -1.39
SCLT1-207ENST00000506233 XYLT2Q9H1B5 865 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms