RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 MRPS21P82921 87 aaKnown RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 PRKCEQ02156 737 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 ELAVL2Q12926 359 aaKnown RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 SRSF6Q13247 344 aaKnown RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 CLN3Q13286 438 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 BYSLQ13895 437 aaKnown RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 CLCA4Q14CN2 919 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 SEC23AQ15436 765 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 AMHR2Q16671 573 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 UBE2SQ16763 222 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 KIF19Q2TAC6 998 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 CEP55Q53EZ4 464 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 HSP90AB4PQ58FF6 505 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 GPR158Q5T848 1215 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 TPGS2Q68CL5 300 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 IQCEQ6IPM2 695 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 MIS18BP1Q6P0N0 1132 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 ANKS3Q6ZW76 656 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 KANSL1Q7Z3B3 1105 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 TMEM150AQ86TG1 271 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 SGMS1Q86VZ5 419 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 TTC30AQ86WT1 665 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 PTRH1Q86Y79 214 aaKnown RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 CKAP2LQ8IYA6 745 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 ZCCHC9Q8N567 271 aaKnown RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 SPRYD3Q8NCJ5 442 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 CNNM3Q8NE01 707 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 ZNF564Q8TBZ8 553 aaPredicted RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 SSC4DQ8WTU2 575 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 VCPIP1Q96JH7 1222 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 ZSCAN10Q96SZ4 725 aaPredicted RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 INO80BQ9C086 356 aaPredicted RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 TASP1Q9H6P5 420 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 KAT14Q9H8E8 782 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 ECT2Q9H8V3 914 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 TMPRSS4Q9NRS4 437 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 GEMIN8Q9NWZ8 242 aaKnown RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 KLK14Q9P0G3 267 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 GABBR1Q9UBS5 961 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 FTSJ1Q9UET6 329 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 FBXL5Q9UKA1 691 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 CIZ1Q9ULV3 898 aaPredicted RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 NFE2L3Q9Y4A8 694 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 YIPF1Q9Y548 306 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 TDRD6O60522 2096 aaKnown RBP3.73□□□□□ -1.81
TCOF1-208ENST00000506063 CROCCQ5TZA2 2017 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 COL6A5A8TX70 2615 aa3.73□□□□□ -1.81
TCOF1-208ENST00000506063 A0A0A0MRY4 1105 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 A0A1W2PQF6 199 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 ZNF316A6NFI3 1004 aaPredicted RBP3.72□□□□□ -1.81
TCOF1-208ENST00000506063 CDRT15L2A8MXV6 281 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 FAM86B1E9PN63 330 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 H0Y8X5 98 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 DPYSL4O14531 572 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 KCNK3O14649 394 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 TRAK2O60296 914 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 PPFIA2O75334 1257 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 FAM86B2P0C5J1 330 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 PCP11498 1178 aaKnown RBP3.72□□□□□ -1.81
TCOF1-208ENST00000506063 CDK4P11802 303 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 GNSP15586 552 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 ELF1P32519 619 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 KIF5BP33176 963 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 BRCC3P46736 316 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 LSSP48449 732 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 GABREP78334 506 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 CYP4F8P98187 520 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 CDC42EP1Q00587 391 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 NCAPHQ15003 741 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 SF3A1Q15459 793 aaKnown RBP3.72□□□□□ -1.81
TCOF1-208ENST00000506063 SHBQ15464 509 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 TBR1Q16650 682 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 EML3Q32P44 896 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 CDCP2Q5VXM1 449 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 IGF2-ASQ6U949 168 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 IL27RAQ6UWB1 636 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 RNF19BQ6ZMZ0 732 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 CCDC81Q6ZN84 652 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 MAMDC2Q7Z304 686 aaPredicted RBP3.72□□□□□ -1.81
TCOF1-208ENST00000506063 RHPN2Q8IUC4 686 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 RGL4Q8IZJ4 473 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 CMTM8Q8IZV2 173 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 PHTF2Q8N3S3 785 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 TTC9BQ8N6N2 239 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 PIGOQ8TEQ8 1089 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 HTR3CQ8WXA8 447 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 CRYGNQ8WXF5 182 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 SLC7A3Q8WY07 619 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 PRR11Q96HE9 360 aaPredicted RBP3.72□□□□□ -1.81
TCOF1-208ENST00000506063 CPB2Q96IY4 423 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 FAM167AQ96KS9 214 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 NLRP4Q96MN2 994 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 ACAP3Q96P50 834 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 MDFIQ99750 246 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 SH2D3AQ9BRG2 576 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 FUCA2Q9BTY2 467 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 REPIN1Q9BWE0 567 aaKnown RBP3.72□□□□□ -1.81
TCOF1-208ENST00000506063 NIFKQ9BYG3 293 aaKnown RBP3.72□□□□□ -1.81
TCOF1-208ENST00000506063 SENP2Q9HC62 589 aa3.72□□□□□ -1.81
TCOF1-208ENST00000506063 ECHDC1Q9NTX5 307 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms