RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 GOLGA8JA6NMD2 632 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 GOLGA6L22H0YM25 854 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 ZNF263O14978 683 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 PRPF40AO75400 957 aaKnown RBP11.21□□□□□ -0.61
NR1I3-222ENST00000506018 DCNP07585 359 aaKnown RBP11.21□□□□□ -0.61
NR1I3-222ENST00000506018 CDC25CP30307 473 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 CCR2P41597 374 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 BFSP1Q12934 665 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 TEAD2Q15562 447 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 WSCD1Q658N2 575 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 C1orf228Q6PIY5 440 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 SHC4Q6S5L8 630 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 TPRG1Q6ZUI0 275 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 UNC13DQ70J99 1090 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 DNAJB7Q7Z6W7 309 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-222ENST00000506018 C1orf210Q8IVY1 113 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 OR10T2Q8NGX3 314 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 C7orf25Q9BPX7 421 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 DDX23Q9BUQ8 820 aaKnown RBP11.21□□□□□ -0.61
NR1I3-222ENST00000506018 FOXQ1Q9C009 403 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 IKZF4Q9H2S9 585 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 SEMA4AQ9H3S1 761 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 TRPV4Q9HBA0 871 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 ABI2Q9NYB9 513 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-222ENST00000506018 CGNQ9P2M7 1197 aaKnown RBP11.21□□□□□ -0.61
NR1I3-222ENST00000506018 PCDHB5Q9Y5E4 795 aa11.21□□□□□ -0.61
NR1I3-222ENST00000506018 PVALEFA0A1B0GWK0 134 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 FAM170BA6NMN3 283 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 GABRR2P28476 465 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 PCSK1P29120 753 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 GDI1P31150 447 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 LHX1P48742 406 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 GRM2Q14416 872 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 DUOXA2Q1HG44 320 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 RESP18Q5W5W9 173 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 WDR49Q8IV35 697 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 MFSD6LQ8IWD5 586 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 TOP6BLQ8N6T0 577 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 C1orf127Q8N9H9 656 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 ZNF507Q8TCN5 953 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 CSGALNACT1Q8TDX6 532 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 BORCS6Q96GS4 357 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 MSANTD3Q96H12 275 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 FNBP1Q96RU3 617 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 TMEM209Q96SK2 561 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 ACBD6Q9BR61 282 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 PLA2G2FQ9BZM2 168 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 MTMR12Q9C0I1 747 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 PDE11AQ9HCR9 933 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 LTB4R2Q9NPC1 389 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 TRPV5Q9NQA5 729 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 HSPBP1Q9NZL4 362 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 PCDHA7Q9UN72 937 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 SNX9Q9Y5X1 595 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 CACNA1IQ9P0X4 2223 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 PATJQ8NI35 1801 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 FANCMQ8IYD8 2048 aa11.2□□□□□ -0.62
NR1I3-222ENST00000506018 HEPACAM2A8MVW5 462 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 LAMTOR5O43504 91 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 VNN2O95498 520 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 HAPLN1P10915 354 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-222ENST00000506018 GLULP15104 373 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 GJA1P17302 382 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 FCARP24071 287 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 RPL10AP62906 217 aaKnown RBP11.19□□□□□ -0.62
NR1I3-222ENST00000506018 KRT85P78386 507 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 DNM1Q05193 864 aaKnown RBP11.19□□□□□ -0.62
NR1I3-222ENST00000506018 PKP1Q13835 747 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 PPP2R5DQ14738 602 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 GPR158Q5T848 1215 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 VITQ6UXI7 678 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 DPH6Q7L8W6 267 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 FRMD5Q7Z6J6 570 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 TMC8Q8IU68 726 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 PDCL2Q8N4E4 241 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 GOLGA5Q8TBA6 731 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 SHKBP1Q8TBC3 707 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 LEO1Q8WVC0 666 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-222ENST00000506018 CCDC47Q96A33 483 aaKnown RBP11.19□□□□□ -0.62
NR1I3-222ENST00000506018 FGFBP2Q9BYJ0 223 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 DNAJC25Q9H1X3 360 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 CRISPLD1Q9H336 500 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 ZNF334Q9HCZ1 680 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-222ENST00000506018 HEBP1Q9NRV9 189 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 INTS13Q9NVM9 706 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 SPATA6Q9NWH7 488 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-222ENST00000506018 GDAP2Q9NXN4 497 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 DDX43Q9NXZ2 648 aaKnown RBP11.19□□□□□ -0.62
NR1I3-222ENST00000506018 UXTQ9UBK9 157 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-222ENST00000506018 USP25Q9UHP3 1055 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 F5P12259 2224 aa11.19□□□□□ -0.62
NR1I3-222ENST00000506018 CHADO15335 359 aa11.18□□□□□ -0.62
NR1I3-222ENST00000506018 MOSPD3O75425 235 aa11.18□□□□□ -0.62
NR1I3-222ENST00000506018 MYL1P05976 194 aa11.18□□□□□ -0.62
NR1I3-222ENST00000506018 CSH1P0DML2 217 aa11.18□□□□□ -0.62
NR1I3-222ENST00000506018 CSH2P0DML3 217 aa11.18□□□□□ -0.62
NR1I3-222ENST00000506018 TNNI1P19237 187 aa11.18□□□□□ -0.62
NR1I3-222ENST00000506018 PTMSP20962 102 aa11.18□□□□□ -0.62
NR1I3-222ENST00000506018 DDX6P26196 483 aaKnown RBP eCLIP11.18□□□□□ -0.62
NR1I3-222ENST00000506018 AFMP43652 599 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms