RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 NEU2Q9Y3R4 380 aa5□□□□□ -1.61
TOPBP1-204ENST00000505804 SNX13Q9Y5W8 968 aa5□□□□□ -1.61
TOPBP1-204ENST00000505804 RAD54BQ9Y620 910 aa5□□□□□ -1.61
TOPBP1-204ENST00000505804 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 CCDC194A0A1B0GVG4 234 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 ANO9A1A5B4 782 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 RHPN2P1A8MT19 583 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 F5H697 171 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 DCLK1O15075 740 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 FOSP01100 380 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 ANXA11P50995 505 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 RPS7P62081 194 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 LONRF3Q496Y0 759 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 GGNQ86UU5 652 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 ARHGEF19Q8IW93 802 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 KRT78Q8N1N4 520 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 PROKR1Q8TCW9 393 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 PARD3BQ8TEW8 1205 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 TBCBQ99426 244 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 SPATA5L1Q9BVQ7 753 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 WDR11Q9BZH6 1224 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 CHST12Q9NRB3 414 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 COL20A1Q9P218 1284 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 HESX1Q9UBX0 185 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 CORO2BQ9UQ03 480 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 HS3ST4Q9Y661 456 aa4.99□□□□□ -1.61
TOPBP1-204ENST00000505804 A0A087WWL8 130 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 F8W8V4 182 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 NARSO43776 548 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 TNFRSF1AP19438 455 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 GCLCP48506 637 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 VAV2P52735 878 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 ZNF134P52741 427 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 SCAPQ12770 1279 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 RAB32Q13637 225 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 IQCB1Q15051 598 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 PREPLQ4J6C6 727 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 LY6G5CQ5SRR4 150 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 SP5Q6BEB4 398 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 ARMC6Q6NXE6 501 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 KCNV1Q6PIU1 500 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 GPR149Q86SP6 731 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 MICU3Q86XE3 530 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 COLGALT2Q8IYK4 626 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 ADGRG5Q8IZF4 528 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 RAPGEF4Q8WZA2 1011 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 NMD3Q96D46 503 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 HEPHQ9BQS7 1158 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 ZNF518BQ9C0D4 1074 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 SLC52A1Q9NWF4 448 aa4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 AFF4Q9UHB7 1163 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-204ENST00000505804 TRGV11A0A075B6L2 103 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 TRIM43BA6NCK2 446 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 E7ENX8 843 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 KPNA5O15131 536 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 PLIN1O60240 522 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 PPFIA4O75335 1185 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 ITGAMP11215 1152 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 RPL17P18621 184 aaKnown RBP4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 NPTX2P47972 431 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 LILRA4P59901 499 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 RPS16P62249 146 aaKnown RBP4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 TAP2Q03519 686 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 PICALMQ13492 652 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 HLXQ14774 488 aaPredicted RBP4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 PTPAQ15257 358 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 SLC44A4Q53GD3 710 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 SYCP2LQ5T4T6 812 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 TMEM108Q6UXF1 575 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 MICALCLQ6ZW33 695 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 FAM9AQ8IZU1 332 aaPredicted RBP4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 OR56A3Q8NH54 315 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 SLC30A5Q8TAD4 765 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 ASB10Q8WXI3 467 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 SNX19Q92543 992 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 TRIM43Q96BQ3 446 aaPredicted RBP4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 PTCD3Q96EY7 689 aaKnown RBP4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 PCGF6Q9BYE7 350 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 MS4A7Q9GZW8 240 aaPredicted RBP4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 BTBD1Q9H0C5 482 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 SERHL2Q9H4I8 314 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 TBC1D30Q9Y2I9 924 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 SPATA31A3Q5VYP0 1347 aa4.97□□□□□ -1.61
TOPBP1-204ENST00000505804 PIPSLA2A3N6 862 aa4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 PYCARD-AS1I3L0S3 204 aa4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 ZNF202O95125 648 aa4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 EGR2P11161 476 aaPredicted RBP4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 ITGALP20701 1170 aa4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 MAKP20794 623 aa4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 ZEB1P37275 1124 aaPredicted RBP4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 VIPR2P41587 438 aa4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 PRIM2P49643 509 aa4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 NDUFV1P49821 464 aa4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 DCAF12L1Q5VU92 463 aa4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 CRIP3Q6Q6R5 217 aa4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 LAYNQ6UX15 382 aa4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 ZDHHC24Q6UX98 284 aa4.96□□□□□ -1.62
TOPBP1-204ENST00000505804 C11orf96Q7Z7L8 435 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms