RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 CCDC185Q8N715 623 aa5.42□□□□□ -1.54
MATR3-211ENST00000505625 SLC44A5Q8NCS7 719 aa5.42□□□□□ -1.54
MATR3-211ENST00000505625 NKX2-3Q8TAU0 364 aa5.42□□□□□ -1.54
MATR3-211ENST00000505625 CARD6Q9BX69 1037 aa5.42□□□□□ -1.54
MATR3-211ENST00000505625 CARD9Q9H257 536 aa5.42□□□□□ -1.54
MATR3-211ENST00000505625 TRPM5Q9NZQ8 1165 aa5.42□□□□□ -1.54
MATR3-211ENST00000505625 CEP152O94986 1710 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 ABCC11Q96J66 1382 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 PHF20L1A8MW92 1017 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 CSDE1O75534 798 aaKnown RBP5.41□□□□□ -1.54
MATR3-211ENST00000505625 TRAPPC6AO75865 159 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 ARL4CP56559 192 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 COPS2P61201 443 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 SUZ12Q15022 739 aaKnown RBP5.41□□□□□ -1.54
MATR3-211ENST00000505625 PUS10Q3MIT2 529 aaKnown RBP5.41□□□□□ -1.54
MATR3-211ENST00000505625 PID1Q7Z2X4 250 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 AGGF1Q8N302 714 aaeCLIP5.41□□□□□ -1.541e-9■□□□□ 10.7
MATR3-211ENST00000505625 MCOLN3Q8TDD5 553 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 MAGOHBQ96A72 148 aaKnown RBP5.41□□□□□ -1.54
MATR3-211ENST00000505625 PRR11Q96HE9 360 aaPredicted RBP5.41□□□□□ -1.54
MATR3-211ENST00000505625 MANSC1Q9H8J5 431 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.41□□□□□ -1.54
MATR3-211ENST00000505625 SHOC2Q9UQ13 582 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 SIK3Q9Y2K2 1263 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 IQSEC2Q5JU85 1478 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 SPAG7O75391 227 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 FSBPO95073 299 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 TRIM16O95361 564 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 PSMA3P25788 255 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 SMARCA1P28370 1054 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 NOS3P29474 1203 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 CASP14P31944 242 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 TCF7P36402 384 aaPredicted RBP5.41□□□□□ -1.54
MATR3-211ENST00000505625 PER3P56645 1201 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 INAVAQ3KP66 663 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 SH3PXD2AQ5TCZ1 1133 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 SLC9A4Q6AI14 798 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 ACOT1Q86TX2 421 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 ATP6V0D2Q8N8Y2 350 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 BCAS4Q8TDM0 211 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 MTBPQ96DY7 904 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 USP26Q9BXU7 913 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 SLC32A1Q9H598 525 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 ZNF556Q9HAH1 456 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 PSD3Q9NYI0 1048 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 STON1Q9Y6Q2 735 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 RPTORQ8N122 1335 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 NPHP3-ACAD11A0A0J9YXS1 232 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 SLC12A8A0AV02 714 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 EEF2KO00418 725 aaKnown RBP5.41□□□□□ -1.54
MATR3-211ENST00000505625 APOL1O14791 398 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 ZNF202O95125 648 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 FKBP9O95302 570 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 PSMD8P48556 350 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 NEK2P51955 445 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 ERVK-9P63128 1117 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 MED21Q13503 144 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 PTPN21Q16825 1174 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 ESRP1Q6NXG1 681 aaKnown RBP5.41□□□□□ -1.54
MATR3-211ENST00000505625 FKBP9P1Q75LS8 142 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 TMEM151BQ8IW70 566 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 PRSS58Q8IYP2 241 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 C2orf73Q8N5S3 287 aaPredicted RBP5.41□□□□□ -1.54
MATR3-211ENST00000505625 GTF3C2Q8WUA4 911 aaPredicted RBP5.41□□□□□ -1.54
MATR3-211ENST00000505625 NACC2Q96BF6 587 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 CD209Q9NNX6 404 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 ERVK-11Q9UQG0 969 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 ADGBQ8N7X0 1667 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 PFASO15067 1338 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 LRRIQ3A6PVS8 624 aaPredicted RBP5.41□□□□□ -1.54
MATR3-211ENST00000505625 NT5C1B-RDH14C9J2C7 533 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 FGAP02671 866 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 FGRP09769 529 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 JUPP14923 745 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 CSTF2P33240 577 aaKnown RBP eCLIP5.41□□□□□ -1.54
MATR3-211ENST00000505625 CPA2P48052 419 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 NFIXQ14938 502 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 LY6KQ17RY6 165 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 SERPINA13PQ6UXR4 307 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 RASSF6Q6ZTQ3 369 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 AHI1Q8N157 1196 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 LIX1Q8N485 282 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 PYROXD1Q8WU10 500 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 PI4K2AQ9BTU6 479 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 ALDH8A1Q9H2A2 487 aaPredicted RBP5.41□□□□□ -1.54
MATR3-211ENST00000505625 SETD4Q9NVD3 440 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.41□□□□□ -1.543e-12■□□□□ 8.4
MATR3-211ENST00000505625 ADA2Q9NZK5 511 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 USP6P35125 1406 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 MROH7Q68CQ1 1323 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 TARSL2A2RTX5 802 aaKnown RBP5.41□□□□□ -1.54
MATR3-211ENST00000505625 CFAP99D6REC4 459 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 SNAP23O00161 211 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 KCNN4O15554 427 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 JAK2O60674 1132 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 CUTAO60888 179 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 CD4P01730 458 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 CXCR5P32302 372 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 GCLMP48507 274 aa5.41□□□□□ -1.54
MATR3-211ENST00000505625 CCT5P48643 541 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms