RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 SH2B1Q9NRF2 756 aaPredicted RBP6.35□□□□□ -1.39
GYPB-205ENST00000505583 GMEB2Q9UKD1 530 aa6.35□□□□□ -1.39
GYPB-205ENST00000505583 CPSF3Q9UKF6 684 aaKnown RBP6.35□□□□□ -1.39
GYPB-205ENST00000505583 CDV3Q9UKY7 258 aaKnown RBP6.35□□□□□ -1.39
GYPB-205ENST00000505583 MAFFQ9ULX9 164 aa6.35□□□□□ -1.39
GYPB-205ENST00000505583 TBX20Q9UMR3 447 aa6.35□□□□□ -1.39
GYPB-205ENST00000505583 LHX6Q9UPM6 363 aa6.35□□□□□ -1.39
GYPB-205ENST00000505583 KMT2BQ9UMN6 2715 aaPredicted RBP6.35□□□□□ -1.39
GYPB-205ENST00000505583 ANO9A1A5B4 782 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 OR6C75A6NL08 312 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 PRR5-ARHGAP8B1AHC4 643 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 HNRNPDLO14979 420 aaKnown RBP6.34□□□□□ -1.39
GYPB-205ENST00000505583 SNPHO15079 494 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 OGTO15294 1046 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 EXTL3O43909 919 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 PIGRP01833 764 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 PDIA4P13667 645 aaKnown RBP6.34□□□□□ -1.39
GYPB-205ENST00000505583 NMT1P30419 496 aaKnown RBP6.34□□□□□ -1.39
GYPB-205ENST00000505583 ALDH1A3P47895 512 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 GPR15P49685 360 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 LIG4P49917 911 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 ZNF131P52739 623 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 NRLP54845 237 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 MLLT6P55198 1093 aaPredicted RBP6.34□□□□□ -1.39
GYPB-205ENST00000505583 ARHGAP8P85298 464 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 PLD1Q13393 1074 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 MYBPC2Q14324 1141 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 MCM6Q14566 821 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 CCDC6Q16204 474 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 CCDC142Q17RM4 750 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 C8orf34Q49A92 452 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 SLC39A12Q504Y0 691 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 RILPL1Q5EBL4 403 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 WSCD1Q658N2 575 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 TRIM68Q6AZZ1 485 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 CRELD2Q6UXH1 353 aaPredicted RBP6.34□□□□□ -1.39
GYPB-205ENST00000505583 PRR23CQ6ZRP0 262 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 GPBP1Q86WP2 473 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 RALGPS2Q86X27 583 aaPredicted RBP6.34□□□□□ -1.39
GYPB-205ENST00000505583 YAF2Q8IY57 180 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 EFCAB13Q8IY85 973 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 FAM160A2Q8N612 972 aaPredicted RBP6.34□□□□□ -1.39
GYPB-205ENST00000505583 MYCT1Q8N699 235 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 GPR161Q8N6U8 529 aaKnown RBP6.34□□□□□ -1.39
GYPB-205ENST00000505583 CELF5Q8N6W0 485 aaKnown RBP6.34□□□□□ -1.39
GYPB-205ENST00000505583 ZSWIM2Q8NEG5 633 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 GIPC2Q8TF65 315 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 KCNN1Q92952 543 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 SECISBP2LQ93073 1101 aaKnown RBP6.34□□□□□ -1.39
GYPB-205ENST00000505583 PSMG2Q969U7 264 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 SEPT5Q99719 369 aaPredicted RBP6.34□□□□□ -1.39
GYPB-205ENST00000505583 RTKNQ9BST9 563 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 MSTO1Q9BUK6 570 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 ZCWPW1Q9H0M4 648 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 TASP1Q9H6P5 420 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 RPF1Q9H9Y2 349 aaKnown RBP6.34□□□□□ -1.39
GYPB-205ENST00000505583 FBRSL1Q9HCM7 1045 aaKnown RBP6.34□□□□□ -1.39
GYPB-205ENST00000505583 HPS4Q9NQG7 708 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 RXFP3Q9NSD7 469 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 SEMA4GQ9NTN9 838 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 TMLHEQ9NVH6 421 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 CCL26Q9Y258 94 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 ANAPC1Q9H1A4 1944 aa6.34□□□□□ -1.39
GYPB-205ENST00000505583 ANTXRLA6NF34 631 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 K7ENM7 598 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 CYB561D2O14569 222 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 SLC30A4O14863 429 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 HCRTO43612 131 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 TRAK2O60296 914 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 PAPSS2O95340 614 aaPredicted RBP6.33□□□□□ -1.4
GYPB-205ENST00000505583 CYP11A1P05108 521 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 NEFLP07196 543 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 RETP07949 1114 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 ADRB1P08588 477 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 ODC1P11926 461 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 HMGA1P17096 107 aaKnown RBP6.33□□□□□ -1.4
GYPB-205ENST00000505583 PLCG1P19174 1290 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 ADSSP30520 456 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 GTF2BQ00403 316 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 KCNA1Q09470 495 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 TMEM132DQ14C87 1099 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 KARSQ15046 597 aaKnown RBP6.33□□□□□ -1.4
GYPB-205ENST00000505583 SF3A2Q15428 464 aaKnown RBP6.33□□□□□ -1.4
GYPB-205ENST00000505583 CSRP2Q16527 193 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 MGAT5BQ3V5L5 792 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 ARHGAP29Q52LW3 1261 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 PPM1JQ5JR12 505 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 SDHAF4Q5VUM1 108 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 FSTL4Q6MZW2 842 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 USP49Q70CQ1 688 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 LONP2Q86WA8 852 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 FAM200AQ8TCP9 573 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 BPIFB1Q8TDL5 484 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 EZH1Q92800 747 aaPredicted RBP6.33□□□□□ -1.4
GYPB-205ENST00000505583 USP13Q92995 863 aaPredicted RBP6.33□□□□□ -1.4
GYPB-205ENST00000505583 E2F7Q96AV8 911 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 CDK5RAP3Q96JB5 506 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 TMX3Q96JJ7 454 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 SLC22A12Q96S37 553 aa6.33□□□□□ -1.4
GYPB-205ENST00000505583 FAM83CQ9BQN1 747 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms