RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 FAM234BA2RU67 622 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 EYA2O00167 538 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 TRIM38O00635 465 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 MTSS1O43312 755 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 INMTO95050 263 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 ITGA5P08648 1049 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 KRT9P35527 623 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 ETV4P43268 484 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 MPP1Q00013 466 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 CTBP1Q13363 440 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 EFR3AQ14156 821 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 TRIM68Q6AZZ1 485 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 USP17L6PQ6QN14 398 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 LIMS2Q7Z4I7 341 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 KRT73Q86Y46 540 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 TMTC2Q8N394 836 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 LILRA3Q8N6C8 439 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 VGLL2Q8N8G2 317 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 TXNDC5Q8NBS9 432 aaKnown RBP4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 NLGN4YQ8NFZ3 816 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 ZNF384Q8TF68 577 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 STON2Q8WXE9 905 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 HDAC2Q92769 488 aaKnown RBP4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 LRRC46Q96FV0 321 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 LCORQ96JN0 433 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 SNX27Q96L92 541 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 ZSWIM3Q96MP5 696 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 GDF15Q99988 308 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 SYT3Q9BQG1 590 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 PYM1Q9BRP8 204 aaKnown RBP4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 STK31Q9BXU1 1019 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 PACSIN1Q9BY11 444 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 CHST8Q9H2A9 424 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 DEF6Q9H4E7 631 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 SAYSD1Q9NPB0 183 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 WASH6PQ9NQA3 447 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 SMC4Q9NTJ3 1288 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 KIF17Q9P2E2 1029 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 PLEKHM1Q9Y4G2 1056 aa4.51□□□□□ -1.69
TRAPPC13-208ENST00000505553 DYTNA2CJ06 578 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 IPO5O00410 1097 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 GRM6O15303 877 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 KLHL18O94889 574 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 JUNP05412 331 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 ITGA2BP08514 1039 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 TXNP10599 105 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 RARBP10826 455 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 ALOX15P16050 662 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 FPR1P21462 350 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 IL1R2P27930 398 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 COPAP53621 1224 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 TOP3AQ13472 1001 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 TIGD6Q17RP2 521 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 AMOTQ4VCS5 1084 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 FAM47AQ5JRC9 791 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 PRAMEF14Q5SWL7 426 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 OTUD7BQ6GQQ9 843 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 ZNF280DQ6N043 979 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 CFAP161Q6P656 301 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 C4orf50Q6ZRC1 276 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 C1orf122Q6ZSJ8 110 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 KRT28Q7Z3Y7 464 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 PDSS2Q86YH6 399 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 GATAD2AQ86YP4 633 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 MPP5Q8N3R9 675 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 DCBLD1Q8N8Z6 715 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 PCSK9Q8NBP7 692 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 REPS2Q8NFH8 660 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 SPPL3Q8TCT6 385 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 SIK2Q9H0K1 926 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 TBC1D23Q9NUY8 699 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 ING3Q9NXR8 418 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 RGL1Q9NZL6 768 aa4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 IFT80Q9P2H3 777 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 HERC5Q9UII4 1024 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 RUVBL1Q9Y265 456 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-208ENST00000505553 AQP12BA6NM10 295 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 EXOC5O00471 708 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 TCERG1O14776 1098 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 PIP5K1BO14986 540 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 SLC43A1O75387 559 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 RASSF9O75901 435 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 NDST3O95803 873 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 ANXA1P04083 346 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 CYP1A1P04798 512 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 GJB1P08034 283 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 RAP2AP10114 183 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 IL1R1P14778 569 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 GABRB3P28472 473 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 ALDH1A3P47895 512 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 PAPOLAP51003 745 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 TLE2Q04725 743 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 ADAM15Q13444 863 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 VPS53Q5VIR6 699 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 RRAGBQ5VZM2 374 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 FAM180BQ6P0A1 224 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 TRMT10BQ6PF06 316 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 KLHL17Q6TDP4 642 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 SEM1Q6ZVN7 128 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms