RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 C10orf76Q5T2E6 689 aa11.07□□□□□ -0.64
TPM3-217ENST00000504663 DENND1BQ6P3S1 775 aa11.07□□□□□ -0.64
TPM3-217ENST00000504663 BCL7CQ8WUZ0 217 aaPredicted RBP11.07□□□□□ -0.64
TPM3-217ENST00000504663 CYFIP2Q96F07 1278 aa11.07□□□□□ -0.64
TPM3-217ENST00000504663 TMEM176AQ96HP8 235 aa11.07□□□□□ -0.64
TPM3-217ENST00000504663 SENP8Q96LD8 212 aa11.07□□□□□ -0.64
TPM3-217ENST00000504663 UROC1Q96N76 676 aa11.07□□□□□ -0.64
TPM3-217ENST00000504663 PKMYT1Q99640 499 aa11.07□□□□□ -0.64
TPM3-217ENST00000504663 NRDE2Q9H7Z3 1164 aa11.07□□□□□ -0.64
TPM3-217ENST00000504663 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.07□□□□□ -0.64
TPM3-217ENST00000504663 COG5Q9UP83 839 aa11.07□□□□□ -0.64
TPM3-217ENST00000504663 A0A0A6YYK5 440 aaPredicted RBP11.06□□□□□ -0.64
TPM3-217ENST00000504663 TMCO5BA8MYB1 307 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 I3L4J1 428 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 THAP12O43422 761 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 RTN2O75298 545 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 MTA2O94776 668 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 FAM163BP0C2L3 166 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 P4HA1P13674 534 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 TNNT1P13805 278 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 TKTP29401 623 aaKnown RBP11.06□□□□□ -0.64
TPM3-217ENST00000504663 EPHB4P54760 987 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 CAMK2BQ13554 666 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 NAA35Q5VZE5 725 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 WSCD1Q658N2 575 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 ARHGAP17Q68EM7 881 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 ACAD10Q6JQN1 1059 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 LLGL2Q6P1M3 1020 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 DPH6Q7L8W6 267 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 KIAA1328Q86T90 577 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 UNC93AQ86WB7 457 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 TTC30AQ86WT1 665 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 TMEM173Q86WV6 379 aaPredicted RBP11.06□□□□□ -0.64
TPM3-217ENST00000504663 PHF13Q86YI8 300 aaPredicted RBP11.06□□□□□ -0.64
TPM3-217ENST00000504663 PASD1Q8IV76 773 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 ADGRF2Q8IZF7 708 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 CRYBG2Q8N1P7 616 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 SLC35F6Q8N357 371 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 TTC39CQ8N584 583 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 LRRC57Q8N9N7 239 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 RSPH1Q8WYR4 309 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 ZNF689Q96CS4 500 aaPredicted RBP11.06□□□□□ -0.64
TPM3-217ENST00000504663 MMS19Q96T76 1030 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 THAP2Q9H0W7 228 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 CWH43Q9H720 699 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 PRDM5Q9NQX1 630 aaPredicted RBP11.06□□□□□ -0.64
TPM3-217ENST00000504663 TJP2Q9UDY2 1190 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 STXBP5LQ9Y2K9 1186 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 PAXBP1Q9Y5B6 917 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 PCDHGC5Q9Y5F6 944 aa11.06□□□□□ -0.64
TPM3-217ENST00000504663 GRID2IPA4D2P6 1211 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 ANKRD62A6NC57 917 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 CYB561D2O14569 222 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 ATMINO43313 823 aaPredicted RBP11.05□□□□□ -0.64
TPM3-217ENST00000504663 GABBR2O75899 941 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 DGKIO75912 1065 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 MICAL2O94851 1124 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 MOCS3O95396 460 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 LSM8O95777 96 aaKnown RBP11.05□□□□□ -0.64
TPM3-217ENST00000504663 FTLP02792 175 aaPredicted RBP11.05□□□□□ -0.64
TPM3-217ENST00000504663 CYP1A2P05177 515 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 H2AFZP0C0S5 128 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 LINC00271P0C7V0 271 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 ACRP10323 421 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 VDRP11473 427 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 SLC11A1P49279 550 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 HADHBP55084 474 aaKnown RBP11.05□□□□□ -0.64
TPM3-217ENST00000504663 WDR5P61964 334 aaKnown RBP11.05□□□□□ -0.64
TPM3-217ENST00000504663 AMPD2Q01433 879 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 PTPN14Q15678 1187 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 PTPN20Q4JDL3 420 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 PAN2Q504Q3 1202 aaKnown RBP11.05□□□□□ -0.64
TPM3-217ENST00000504663 ARHGAP29Q52LW3 1261 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 LCLAT1Q6UWP7 414 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 TRIM72Q6ZMU5 477 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 PAQR9Q6ZVX9 377 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 H2AFVQ71UI9 128 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 TMCO2Q7Z6W1 182 aaPredicted RBP11.05□□□□□ -0.64
TPM3-217ENST00000504663 VPS36Q86VN1 386 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 MCOLN2Q8IZK6 566 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 C12orf29Q8N999 325 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 C1orf131Q8NDD1 294 aaKnown RBP11.05□□□□□ -0.64
TPM3-217ENST00000504663 DDX27Q96GQ7 796 aaKnown RBP11.05□□□□□ -0.64
TPM3-217ENST00000504663 SUSD3Q96L08 255 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 NT5C1AQ9BXI3 368 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 TSGA10Q9BZW7 698 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 LHX5Q9H2C1 402 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 OSGEPQ9NPF4 335 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 IL23AQ9NPF7 189 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 CRTAC1Q9NQ79 661 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 GTF3C4Q9UKN8 822 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 GUCA1BQ9UMX6 200 aa11.05□□□□□ -0.64
TPM3-217ENST00000504663 ABHD14A-ACY1A0A1B0GW23 586 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 MACROD2A1Z1Q3 448 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 TULP2O00295 520 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 BUB1O43683 1085 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 KRT86O43790 486 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 MMP8P22894 467 aa11.04□□□□□ -0.64
TPM3-217ENST00000504663 GPD2P43304 727 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms