RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 C16orf52Q8NHV5 167 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 RFKQ969G6 155 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 REPS1Q96D71 796 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 CCM2LQ9NUG4 571 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 NR2E3Q9Y5X4 410 aa2.78□□□□□ -1.96
HMGB3P17-201ENST00000504195 ADGRA2Q96PE1 1338 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 CD8B2A6NJW9 211 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 AGFG2O95081 481 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 ZFXP17010 805 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 HTR6P50406 440 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 NANOS2P60321 138 aaKnown RBP2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 TMPRSS15P98073 1019 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 STAT4Q14765 748 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 AARS2Q5JTZ9 985 aaKnown RBP2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 UTP14CQ5TAP6 766 aaKnown RBP2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 MIS18BP1Q6P0N0 1132 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 C9orf47Q6ZRZ4 202 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 RSPH3Q86UC2 560 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 ADGRG5Q8IZF4 528 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 FAM9AQ8IZU1 332 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 AOPEPQ8N6M6 819 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 OR2I1PQ8NGU4 316 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 CHAC2Q8WUX2 184 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 TLR10Q9BXR5 811 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 PACSIN1Q9BY11 444 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 VTA1Q9NP79 307 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 TDP1Q9NUW8 608 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 CTTNBP2NLQ9P2B4 639 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 SAP30BPQ9UHR5 308 aaKnown RBP2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 GPR45Q9Y5Y3 372 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 SHROOM4Q9ULL8 1493 aa2.77□□□□□ -1.97
HMGB3P17-201ENST00000504195 SPATA31A3Q5VYP0 1347 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 WASHC2AQ641Q2 1341 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 CCDC195A0A1B0GUA6 201 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 VWC2LB2RUY7 222 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 TOR1BO14657 336 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 GRM6O15303 877 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 BCAR3O75815 825 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 T-ENOLP0DO92 83 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 ARHGAP25P42331 645 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 PIGFQ07326 219 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 GTF2H3Q13889 308 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 PABPC1LQ4VXU2 614 aaKnown RBP2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 TEDDM1Q5T9Z0 273 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 LVRNQ6Q4G3 990 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 MIGA2Q7L4E1 593 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 AMOTL1Q8IY63 956 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 AFAP1L2Q8N4X5 818 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 NRACQ8N912 160 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 C8orf58Q8NAV2 365 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 DPF2Q92785 391 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 COQ8BQ96D53 544 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 TMX3Q96JJ7 454 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 JKAMPQ9P055 326 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 ERRFI1Q9UJM3 462 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 INTUQ9ULD6 942 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 TBX22Q9Y458 520 aa2.76□□□□□ -1.97
HMGB3P17-201ENST00000504195 WDR17Q8IZU2 1322 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 SMIM22K7EJ46 135 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 TRIAP1O43715 76 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 PRKD3O94806 890 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 SUN1O94901 812 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 AGXTP21549 392 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 SLC6A4P31645 630 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 WASP42768 502 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 Q4G0T1 1027 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 SHC4Q6S5L8 630 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 ZNF365Q70YC5 407 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 NOP9Q86U38 636 aaKnown RBP2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 TMPRSS12Q86WS5 348 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 SPATS2Q86XZ4 545 aaKnown RBP2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 DCP1BQ8IZD4 617 aaKnown RBP2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 CFAP52Q8N1V2 620 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 PPM1NQ8N819 430 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 IL17RDQ8NFM7 739 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 NRG4Q8WWG1 115 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 SSH1Q8WYL5 1049 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 ASB2Q96Q27 587 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 SLC2A13Q96QE2 648 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 FAM118BQ9BPY3 351 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 IMPG2Q9BZV3 1241 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 ARHGEF3Q9NR81 526 aa2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 ZNF277Q9NRM2 450 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 FNDC1Q4ZHG4 1894 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P17-201ENST00000504195 GPR39O43194 453 aa2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 SMAD6O43541 496 aaKnown RBP2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 SLC43A1O75387 559 aa2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 NHLRC4P0CG21 123 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 CDK11BP21127 795 aaKnown RBP2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 NPTX2P47972 431 aa2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 KCNJ5P48544 419 aa2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 ALDH9A1P49189 494 aa2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 HNRNPMP52272 730 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 POU6F2P78424 691 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 CDC42EP1Q00587 391 aa2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 MC2RQ01718 297 aa2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 CLUL1Q15846 466 aa2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 UBAP2Q5T6F2 1119 aaKnown RBP2.74□□□□□ -1.97
HMGB3P17-201ENST00000504195 TAPT1Q6NXT6 567 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms