RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SUSD3Q96L08 255 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 TBC1D32Q96NH3 1257 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 SLC46A2Q9BY10 475 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 ZSWIM4Q9H7M6 989 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 BCCIPQ9P287 314 aaKnown RBP eCLIP13.72□□□□□ -0.21
LSM6-204ENST00000504181 MMP17Q9ULZ9 603 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 ASB3Q9Y575 518 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 DOPEY2Q9Y3R5 2298 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 TEP1Q99973 2627 aaKnown RBP13.72□□□□□ -0.21
LSM6-204ENST00000504181 FAM149AA5PLN7 773 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 SYPP08247 313 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 BFSP1Q12934 665 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 EPHA7Q15375 998 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 CRY1Q16526 586 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 DCAF4L1Q3SXM0 396 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 SPDYCQ5MJ68 293 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 CDCA2Q69YH5 1023 aaPredicted RBP13.71□□□□□ -0.21
LSM6-204ENST00000504181 PPP4R3AQ6IN85 833 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 CC2D1AQ6P1N0 951 aaPredicted RBP13.71□□□□□ -0.21
LSM6-204ENST00000504181 TPH2Q8IWU9 490 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 CPA6Q8N4T0 437 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 APPL2Q8NEU8 664 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 WHAMMQ8TF30 809 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 USP13Q92995 863 aaPredicted RBP13.71□□□□□ -0.21
LSM6-204ENST00000504181 GCNAQ96QF7 691 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 ECT2Q9H8V3 914 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 GPRC5CQ9NQ84 441 aa13.71□□□□□ -0.21
LSM6-204ENST00000504181 AP5Z1O43299 807 aa13.7□□□□□ -0.22
LSM6-204ENST00000504181 PRPF3O43395 683 aaKnown RBP13.7□□□□□ -0.22
LSM6-204ENST00000504181 USO1O60763 962 aaKnown RBP13.7□□□□□ -0.22
LSM6-204ENST00000504181 AVPR1AP37288 418 aa13.7□□□□□ -0.22
LSM6-204ENST00000504181 RPL6Q02878 288 aaKnown RBP13.7□□□□□ -0.22
LSM6-204ENST00000504181 CAMK2BQ13554 666 aa13.7□□□□□ -0.22
LSM6-204ENST00000504181 MAP7D1Q3KQU3 841 aa13.7□□□□□ -0.22
LSM6-204ENST00000504181 TTC22Q5TAA0 569 aa13.7□□□□□ -0.22
LSM6-204ENST00000504181 CREB3L3Q68CJ9 461 aa13.7□□□□□ -0.22
LSM6-204ENST00000504181 PCSK4Q6UW60 755 aa13.7□□□□□ -0.22
LSM6-204ENST00000504181 GLRX5Q86SX6 157 aa13.7□□□□□ -0.22
LSM6-204ENST00000504181 ITIH5Q86UX2 942 aa13.7□□□□□ -0.22
LSM6-204ENST00000504181 TTC16Q8NEE8 873 aa13.7□□□□□ -0.22
LSM6-204ENST00000504181 CCDC43Q96MW1 224 aaKnown RBP13.7□□□□□ -0.22
LSM6-204ENST00000504181 LPIN3Q9BQK8 851 aa13.7□□□□□ -0.22
LSM6-204ENST00000504181 KIAA1522Q9P206 1035 aaPredicted RBP13.7□□□□□ -0.22
LSM6-204ENST00000504181 CAPN8A6NHC0 703 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 GOLGA8CPA6NN73 597 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 CBFA2T3O75081 653 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 MARCKSP29966 332 aaPredicted RBP13.69□□□□□ -0.22
LSM6-204ENST00000504181 CDC25CP30307 473 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 NLRP5P59047 1200 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 PDGFRLQ15198 375 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 CENPPQ6IPU0 288 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 MOXD1Q6UVY6 613 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 LRRC69Q6ZNQ3 347 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 RABEPKQ7Z6M1 372 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 PGBD3Q8N328 593 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 MAB21L3Q8N8X9 362 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 CEP120Q8N960 986 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 FAM181AQ8N9Y4 354 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 ATAD1Q8NBU5 361 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 SETD7Q8WTS6 366 aaKnown RBP13.69□□□□□ -0.22
LSM6-204ENST00000504181 HMGB4Q8WW32 186 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 C18orf25Q96B23 403 aaPredicted RBP13.69□□□□□ -0.22
LSM6-204ENST00000504181 ZMAT2Q96NC0 199 aaKnown RBP13.69□□□□□ -0.22
LSM6-204ENST00000504181 PNMA5Q96PV4 448 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 C22orf23Q9BZE7 217 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 IL21Q9HBE4 155 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 KCNMB3Q9NPA1 279 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 TDP1Q9NUW8 608 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 SLC38A7Q9NVC3 462 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 DNMT3LQ9UJW3 386 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 PCOLCE2Q9UKZ9 415 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 PCDHB8Q9UN66 801 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 TIMM13Q9Y5L4 95 aaPredicted RBP13.69□□□□□ -0.22
LSM6-204ENST00000504181 MYH10P35580 1976 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 MYH11P35749 1972 aa13.69□□□□□ -0.22
LSM6-204ENST00000504181 KNTC1P50748 2209 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 UBR5O95071 2799 aaPredicted RBP13.68□□□□□ -0.22
LSM6-204ENST00000504181 MTMR11A4FU01 709 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 K7EQS6 105 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 CDR1P51861 262 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 OSTNP61366 133 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 AKAP17AQ02040 695 aaKnown RBP13.68□□□□□ -0.22
LSM6-204ENST00000504181 YWHAHQ04917 246 aaPredicted RBP13.68□□□□□ -0.22
LSM6-204ENST00000504181 ZNF33AQ06730 810 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 GPR17Q13304 367 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 KRT25Q7Z3Z0 450 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 GALNT15Q8N3T1 639 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
LSM6-204ENST00000504181 CCDC26Q8TAB7 109 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 FAM20AQ96MK3 541 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 ARID3AQ99856 593 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 CCDC113Q9H0I3 377 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 KIF9Q9HAQ2 790 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 TOR4AQ9NXH8 423 aa13.68□□□□□ -0.22
LSM6-204ENST00000504181 TEX51A0A1B0GUA7 166 aa13.67□□□□□ -0.22
LSM6-204ENST00000504181 ACKR2O00590 384 aa13.67□□□□□ -0.22
LSM6-204ENST00000504181 SLITRK3O94933 977 aa13.67□□□□□ -0.22
LSM6-204ENST00000504181 ATXN1LP0C7T5 689 aaKnown RBP13.67□□□□□ -0.22
LSM6-204ENST00000504181 NMT1P30419 496 aaKnown RBP13.67□□□□□ -0.22
LSM6-204ENST00000504181 EIF2S3P41091 472 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms