RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 TAP1Q03518 808 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 NFX1Q12986 1120 aaKnown RBP23.79■■□□□ 1.4
PCDH1-204ENST00000503492 TMEM132DQ14C87 1099 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 CCNG2Q16589 344 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 DGKDQ16760 1214 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 SYDE1Q6ZW31 735 aaPredicted RBP23.79■■□□□ 1.4
PCDH1-204ENST00000503492 ATL2Q8NHH9 583 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 FAM129AQ9BZQ8 928 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 CWC15Q9P013 229 aaKnown RBP23.79■■□□□ 1.4
PCDH1-204ENST00000503492 KAT6AQ92794 2004 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 A6NNZ2 444 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 CILPO75339 1184 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 ADCY2Q08462 1091 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 CALCOCO2Q13137 446 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 TRIP13Q15645 432 aaPredicted RBP23.79■■□□□ 1.4
PCDH1-204ENST00000503492 KYAT1Q16773 422 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 TUBB8Q3ZCM7 444 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 DENND2CQ68D51 928 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 IQSEC1Q6DN90 963 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 RCOR2Q8IZ40 523 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 GRK7Q8WTQ7 553 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 HOMER3Q9NSC5 361 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 SETD4Q9NVD3 440 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 AGAP1Q9UPQ3 857 aa23.79■■□□□ 1.4
PCDH1-204ENST00000503492 ITGBL1O95965 494 aaPredicted RBP23.78■■□□□ 1.4
PCDH1-204ENST00000503492 GUCY1A3Q02108 690 aa23.78■■□□□ 1.4
PCDH1-204ENST00000503492 SLC29A2Q14542 456 aa23.78■■□□□ 1.4
PCDH1-204ENST00000503492 LRRC38Q5VT99 294 aa23.78■■□□□ 1.4
PCDH1-204ENST00000503492 TXNRD3NBQ6F5E7 133 aa23.78■■□□□ 1.4
PCDH1-204ENST00000503492 HPDLQ96IR7 371 aa23.78■■□□□ 1.4
PCDH1-204ENST00000503492 CCDC114Q96M63 670 aa23.78■■□□□ 1.4
PCDH1-204ENST00000503492 ACAP3Q96P50 834 aa23.78■■□□□ 1.4
PCDH1-204ENST00000503492 SLITRK1Q96PX8 696 aa23.78■■□□□ 1.4
PCDH1-204ENST00000503492 LCMT1Q9UIC8 334 aa23.78■■□□□ 1.4
PCDH1-204ENST00000503492 STRIP2Q9ULQ0 834 aa23.78■■□□□ 1.4
PCDH1-204ENST00000503492 NOVA2Q9UNW9 492 aaKnown RBP23.78■■□□□ 1.4
PCDH1-204ENST00000503492 KRT1P04264 644 aa23.78■■□□□ 1.4
PCDH1-204ENST00000503492 PTPN11Q06124 597 aaPredicted RBP23.78■■□□□ 1.4
PCDH1-204ENST00000503492 PIGHQ14442 188 aaPredicted RBP23.78■■□□□ 1.4
PCDH1-204ENST00000503492 ZNF410Q86VK4 478 aa23.78■■□□□ 1.4
PCDH1-204ENST00000503492 FEZ2Q9UHY8 353 aaPredicted RBP23.78■■□□□ 1.4
PCDH1-204ENST00000503492 NEU2Q9Y3R4 380 aa23.78■■□□□ 1.4
PCDH1-204ENST00000503492 GOLGA8SH3BPF8 625 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 GAS8O95995 478 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 RARGP13631 454 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 KRT10P13645 584 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 SLMAPQ14BN4 828 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 SKIDA1Q1XH10 827 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 KIZQ2M2Z5 673 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 RHBDF2Q6PJF5 856 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 MFSD7Q6UXD7 560 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 NIPA2Q8N8Q9 360 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 C2orf69Q8N8R5 385 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 TMEM176AQ96HP8 235 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 RBM41Q96IZ5 413 aaKnown RBP23.77■■□□□ 1.4
PCDH1-204ENST00000503492 CYP3A43Q9HB55 503 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 DCDC2CA8MYV0 355 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 ECM2O94769 699 aaPredicted RBP23.77■■□□□ 1.4
PCDH1-204ENST00000503492 CELF2O95319 508 aaKnown RBP23.77■■□□□ 1.4
PCDH1-204ENST00000503492 ITIH2P19823 946 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 RFC1P35251 1148 aaPredicted RBP23.77■■□□□ 1.4
PCDH1-204ENST00000503492 SNF8Q96H20 258 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 CPXM1Q96SM3 734 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 RABEP2Q9H5N1 569 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 AAASQ9NRG9 546 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 C2CD2Q9Y426 696 aa23.77■■□□□ 1.4
PCDH1-204ENST00000503492 MDH1P40925 334 aaKnown RBP23.76■■□□□ 1.39
PCDH1-204ENST00000503492 ZFYVE27Q5T4F4 411 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 JOSD2Q8TAC2 188 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 PPP1R13LQ8WUF5 828 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 ADPGKQ9BRR6 497 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 DPP3Q9NY33 737 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 CITO14578 2027 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 SLC15A5A6NIM6 579 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 SIGLEC16A6NMB1 481 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 CAND2O75155 1236 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 CETN2P41208 172 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 TMEM62Q0P6H9 643 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 PRAMEF19Q5SWL8 479 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 KAZNQ674X7 775 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 ACSF2Q96CM8 615 aaPredicted RBP23.76■■□□□ 1.39
PCDH1-204ENST00000503492 ADAMTS10Q9H324 1103 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 ITGA11Q9UKX5 1188 aa23.76■■□□□ 1.39
PCDH1-204ENST00000503492 RIPK2O43353 540 aa23.75■■□□□ 1.39
PCDH1-204ENST00000503492 MICAL2O94851 1124 aa23.75■■□□□ 1.39
PCDH1-204ENST00000503492 CCDC25Q86WR0 208 aa23.75■■□□□ 1.39
PCDH1-204ENST00000503492 ARFGAP2Q8N6H7 521 aa23.75■■□□□ 1.39
PCDH1-204ENST00000503492 BCAS4Q8TDM0 211 aa23.75■■□□□ 1.39
PCDH1-204ENST00000503492 RAPGEF5Q92565 580 aa23.75■■□□□ 1.39
PCDH1-204ENST00000503492 CXCL16Q9H2A7 254 aa23.75■■□□□ 1.39
PCDH1-204ENST00000503492 DYNC1LI2O43237 492 aaPredicted RBP23.74■■□□□ 1.39
PCDH1-204ENST00000503492 ERBB2P04626 1255 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 KRT3P12035 628 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 P4HA1P13674 534 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 LSP1P33241 339 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 GRM5P41594 1212 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 MAGOHP61326 146 aaKnown RBP23.74■■□□□ 1.39
PCDH1-204ENST00000503492 PSMC1P62191 440 aaKnown RBP23.74■■□□□ 1.39
PCDH1-204ENST00000503492 SPOCD1Q6ZMY3 1216 aa23.74■■□□□ 1.39
PCDH1-204ENST00000503492 HOOK3Q86VS8 718 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms