RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 POGKQ9P215 609 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 ABCF2Q9UG63 623 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 FAM50BQ9Y247 325 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 A0A088AWK7 358 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 CAPN8A6NHC0 703 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 DRGXA6NNA5 263 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 CXorf49A8MYA2 514 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 APAF1O14727 1248 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 GRM6O15303 877 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 TEX33O43247 280 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 PLIN1O60240 522 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 ARIH2O95376 493 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 BMP15O95972 392 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 ZBED1O96006 694 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 SBK3P0C264 359 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 TYRP14679 529 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 RHCEP18577 417 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 ATP5JP18859 108 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 AGFG1P52594 562 aaKnown RBP3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 NKX6-1P78426 367 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 RHDQ02161 417 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 PLS1Q14651 629 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 ATP2B3Q16720 1220 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 KIAA0753Q2KHM9 967 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 FLYWCH1Q4VC44 716 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 COBLL1Q53SF7 1204 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 B3GNTL1Q67FW5 361 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 OTUD7BQ6GQQ9 843 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 COL23A1Q86Y22 540 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 KIAA0319LQ8IZA0 1049 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 DCBLD1Q8N8Z6 715 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 PJA1Q8NG27 643 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 OR56A1Q8NGH5 318 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 ZBTB9Q96C00 473 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 SLC35A4Q96G79 324 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 FAM167AQ96KS9 214 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 NT5C1BQ96P26 610 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 NEU1Q99519 415 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 POLR3GLQ9BT43 218 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 C11orf54Q9H0W9 315 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 DDX21Q9NR30 783 aaKnown RBP eCLIP3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 STAP2Q9UGK3 403 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 SLC23A1Q9UHI7 598 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 FEZ2Q9UHY8 353 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 L1RE1Q9UN81 338 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 MAP3K2Q9Y2U5 619 aa3.06□□□□□ -1.92
HMGB1P35-201ENST00000503360 PNPLA7Q6ZV29 1317 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 TCRBV7S2A1N4TA0A589 114 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 NT5C1B-RDH14C9J2C7 533 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 F2RL2O00254 374 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 KIAA0391O15091 583 aaKnown RBP3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 ORC4O43929 436 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 HRGP04196 525 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 CD1AP06126 327 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 IGKV2-30P06310 120 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 ELANEP08246 267 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 SNRPA1P09661 255 aaKnown RBP3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 NBPF7P0C2Y1 421 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 MTHFD1P11586 935 aaKnown RBP3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 PRDX5P30044 214 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 CACNB3P54284 484 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 CLRN1P58418 232 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 RAP2BP61225 183 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 RAB1AP62820 205 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 FAM193AP78312 1265 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 GPSM2P81274 684 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 EIF2B5Q13144 721 aaKnown RBP3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 FGL2Q14314 439 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 CNN3Q15417 329 aaKnown RBP3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 SAFBQ15424 915 aaKnown RBP eCLIP3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 DACT2Q5SW24 774 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 RNF220Q5VTB9 566 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 SWSAP1Q6NVH7 229 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 ZNF529Q6P280 563 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 DARS2Q6PI48 645 aaKnown RBP3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 SEM1Q6ZVN7 128 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 MAEAQ7L5Y9 396 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 UBE3BQ7Z3V4 1068 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 DPF1Q92782 380 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 MTFMTQ96DP5 389 aaKnown RBP3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 AIFM2Q9BRQ8 373 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 REXO4Q9GZR2 422 aaKnown RBP3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 BHMT2Q9H2M3 363 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 WDCPQ9H6R7 721 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 CASS4Q9NQ75 786 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 KCTD5Q9NXV2 234 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 CPA4Q9UI42 421 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 KCNE5Q9UJ90 142 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 PCDHGB6Q9Y5F9 930 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 PCDHA1Q9Y5I3 950 aa3.05□□□□□ -1.92
HMGB1P35-201ENST00000503360 A0A1W2PPL8 197 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 CFAP69A5D8W1 941 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 GOLIM4O00461 696 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 ERN1O75460 977 aaKnown RBP3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 POMCP01189 267 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 AHSGP02765 367 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 FTH1P19P0C7X4 201 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 PHKG2P15735 406 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 GPD1P21695 349 aa3.04□□□□□ -1.92
HMGB1P35-201ENST00000503360 PEX2P28328 305 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms