RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 ABCB4P21439 1286 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 BRD2P25440 801 aaKnown RBP8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 CYP2C18P33260 490 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 RAP1GAPP47736 663 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 GSCP56915 257 aaPredicted RBP8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 SLC8A3P57103 927 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 TUBB4BP68371 445 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 DSC1Q08554 894 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 ELAVL2Q12926 359 aaKnown RBP8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 LRRC26Q2I0M4 334 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 NAA35Q5VZE5 725 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 SCARA3Q6AZY7 606 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 MON1BQ7L1V2 547 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 ERICH1Q86X53 443 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 PDCL2Q8N4E4 241 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 SLC35G2Q8TBE7 412 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 IPO4Q8TEX9 1081 aaKnown RBP8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 ZNF653Q96CK0 615 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 SCLYQ96I15 445 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 SUSD3Q96L08 255 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 WDR24Q96S15 920 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 MRPL45Q9BRJ2 306 aaKnown RBP8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 TMEM175Q9BSA9 504 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 PACSIN1Q9BY11 444 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 ELOVL4Q9GZR5 314 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 MCOLN1Q9GZU1 580 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 THAP2Q9H0W7 228 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 CXCL16Q9H2A7 254 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 ACP6Q9NPH0 428 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 CYLDQ9NQC7 956 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 TAS2R14Q9NYV8 317 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 ADAM22Q9P0K1 906 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 CTTNBP2NLQ9P2B4 639 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 TRIM10Q9UDY6 481 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 PRKAG2Q9UGJ0 569 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 L1RE1Q9UN81 338 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 STXBP5LQ9Y2K9 1186 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 DUSP10Q9Y6W6 482 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 TRIP11Q15643 1979 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 TANC1Q9C0D5 1861 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 A0A0U1RQJ8 604 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 CASTOR2A6NHX0 329 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 M0QZQ0 153 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 O00370 1275 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 SPTLC1O15269 473 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 BUB1O43683 1085 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 PALMO75781 387 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 URI1O94763 535 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 MICAL2O94851 1124 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 AMHP03971 560 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 TCP1P17987 556 aaKnown RBP8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 MMP8P22894 467 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 SLC1A1P43005 524 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 TERF1P54274 439 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 BCAT1P54687 386 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 MAPRE1Q15691 268 aaKnown RBP8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 CLLU1OSQ5K130 101 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 PAPD7Q5XG87 772 aaKnown RBP8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 MFSD5Q6N075 450 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 C11orf63Q6NUN7 778 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 DEFB128Q7Z7B8 93 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 PALB2Q86YC2 1186 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 ZDHHC17Q8IUH5 632 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 COLGALT2Q8IYK4 626 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 THEM5Q8N1Q8 247 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 LRRC43Q8N309 656 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 TPCN2Q8NHX9 752 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 ZNF564Q8TBZ8 553 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 STK32AQ8WU08 396 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 KBTBD7Q8WVZ9 684 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 ATRIPQ8WXE1 791 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 CPA5Q8WXQ8 436 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 TFAP2BQ92481 460 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 TWNKQ96RR1 684 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 COLEC11Q9BWP8 271 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 OXCT2Q9BYC2 517 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 IRX2Q9BZI1 471 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 L2HGDHQ9H9P8 463 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 PARVAQ9NVD7 372 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 TBC1D13Q9NVG8 400 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 RNF14Q9UBS8 474 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 CNOT8Q9UFF9 292 aaKnown RBP8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 CDH9Q9ULB4 789 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 PCDHB8Q9UN66 801 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 SAR1BQ9Y6B6 198 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 CAPN6Q9Y6Q1 641 aa8.62□□□□□ -1.03
TOPBP1-202ENST00000503338 SCN1AP35498 2009 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 KIAA0100Q14667 2235 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 MIF4GDA9UHW6 222 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 M0QYV0 167 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 MYO1FO00160 1098 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 CES2O00748 559 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 SYN3O14994 580 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 ABL1P00519 1130 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 ALDH2P05091 517 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 FGFR1P11362 822 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 DESP17661 470 aa8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 IBSPP21815 317 aaPredicted RBP8.61□□□□□ -1.03
TOPBP1-202ENST00000503338 GPD2P43304 727 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms