RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 HLTFQ14527 1009 aaKnown RBP eCLIP5.33□□□□□ -1.56
CDC42SE2-204ENST00000502639 C3orf38Q5JPI3 329 aa5.33□□□□□ -1.56
CDC42SE2-204ENST00000502639 SP5Q6BEB4 398 aaPredicted RBP5.33□□□□□ -1.56
CDC42SE2-204ENST00000502639 CLNKQ7Z7G1 428 aa5.33□□□□□ -1.56
CDC42SE2-204ENST00000502639 KRT78Q8N1N4 520 aa5.33□□□□□ -1.56
CDC42SE2-204ENST00000502639 DNAJC5GQ8N7S2 189 aa5.33□□□□□ -1.56
CDC42SE2-204ENST00000502639 TMEM125Q96AQ2 219 aa5.33□□□□□ -1.56
CDC42SE2-204ENST00000502639 SLC46A1Q96NT5 459 aa5.33□□□□□ -1.56
CDC42SE2-204ENST00000502639 COL20A1Q9P218 1284 aa5.33□□□□□ -1.56
CDC42SE2-204ENST00000502639 XPR1Q9UBH6 696 aa5.33□□□□□ -1.56
CDC42SE2-204ENST00000502639 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 PIPSLA2A3N6 862 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 TRIM43BA6NCK2 446 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 E7ENX8 843 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 PMM2O15305 246 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 PQBP1O60828 265 aaKnown RBP5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 FOSP01100 380 aaPredicted RBP5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 THP07101 528 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 HNRNPMP52272 730 aaKnown RBP eCLIP5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 RPS7P62081 194 aaKnown RBP5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 TAP2Q03519 686 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 SLC13A2Q13183 592 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 SAFBQ15424 915 aaKnown RBP eCLIP5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 SPDYE7PQ495Y7 208 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 ZNF783Q6ZMS7 281 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 FAM9AQ8IZU1 332 aaPredicted RBP5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 SYNE4Q8N205 404 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 SLC15A4Q8N697 577 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 OR6B3Q8NGW1 331 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 OR56A3Q8NH54 315 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 TRIM43Q96BQ3 446 aaPredicted RBP5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 TTYH3Q9C0H2 523 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 TBC1D30Q9Y2I9 924 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 HS3ST3A1Q9Y663 406 aa5.32□□□□□ -1.56
CDC42SE2-204ENST00000502639 GRID2IPA4D2P6 1211 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 TOR1BO14657 336 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 MAP4K4O95819 1239 aaPredicted RBP5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 BRAFP15056 766 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 ACVRL1P37023 503 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 GCLCP48506 637 aaPredicted RBP5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 ZXDAP98168 799 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 FPGSQ05932 587 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 LONRF3Q496Y0 759 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 VPS53Q5VIR6 699 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 PPP4R4Q6NUP7 873 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 ARMC6Q6NXE6 501 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 KCNV1Q6PIU1 500 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 NOL8Q76FK4 1167 aaKnown RBP5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 SLC30A5Q8TAD4 765 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 LPIN2Q92539 896 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 PHKBQ93100 1093 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 NMD3Q96D46 503 aaKnown RBP5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 HEPHQ9BQS7 1158 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 MESP1Q9BRJ9 268 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 LRRC27Q9C0I9 530 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 SIK2Q9H0K1 926 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 KIAA1586Q9HCI6 787 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 SACM1LQ9NTJ5 587 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 SYBUQ9NX95 663 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 TMX2Q9Y320 296 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 RAD54BQ9Y620 910 aa5.31□□□□□ -1.56
CDC42SE2-204ENST00000502639 SPATA31A3Q5VYP0 1347 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 TBC1D4O60343 1298 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 MGEA5O60502 916 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 KRT18P05783 430 aaKnown RBP5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 IL1R1P14778 569 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 MAKP20794 623 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 VIPR2P41587 438 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 NPTX2P47972 431 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 RPS16P62249 146 aaKnown RBP5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 HTRA4P83105 476 aaPredicted RBP5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 HLXQ14774 488 aaPredicted RBP5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 ZIK1Q3SY52 487 aaPredicted RBP5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 LY6G5CQ5SRR4 150 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 DCAF12L1Q5VU92 463 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 IL31Q6EBC2 164 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 ZDHHC24Q6UX98 284 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 MICALCLQ6ZW33 695 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 ZNF280BQ86YH2 543 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 CCAR1Q8IX12 1150 aaKnown RBP5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 LNX2Q8N448 690 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 FAM109AQ8N4B1 249 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 SSH3Q8TE77 659 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 SUCLG2Q96I99 432 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 CCDC136Q96JN2 1154 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 Q96MF0 132 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 ZNF518BQ9C0D4 1074 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 SCAND2PQ9GZW5 306 aaPredicted RBP5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 BTBD1Q9H0C5 482 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 NUP62CLQ9H1M0 184 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 ZNF287Q9HBT7 754 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 AFF4Q9UHB7 1163 aaKnown RBP5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 ING1Q9UK53 422 aaPredicted RBP5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 NEU2Q9Y3R4 380 aa5.3□□□□□ -1.56
CDC42SE2-204ENST00000502639 SALL3Q9BXA9 1300 aa5.29□□□□□ -1.56
CDC42SE2-204ENST00000502639 TRGV11A0A075B6L2 103 aa5.29□□□□□ -1.56
CDC42SE2-204ENST00000502639 ANO9A1A5B4 782 aa5.29□□□□□ -1.56
CDC42SE2-204ENST00000502639 OVOL3O00110 214 aa5.29□□□□□ -1.56
CDC42SE2-204ENST00000502639 MYL1P05976 194 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms