RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 CASKIN2Q8WXE0 1202 aa19.34■□□□□ 0.69
LINC00535-201ENST00000501400 NAP1L3Q99457 506 aaPredicted RBP19.34■□□□□ 0.69
LINC00535-201ENST00000501400 MRPL45Q9BRJ2 306 aaKnown RBP19.34■□□□□ 0.69
LINC00535-201ENST00000501400 UBXN6Q9BZV1 441 aa19.34■□□□□ 0.69
LINC00535-201ENST00000501400 EPB41L5Q9HCM4 733 aa19.34■□□□□ 0.69
LINC00535-201ENST00000501400 SRRDQ9UH36 339 aa19.34■□□□□ 0.69
LINC00535-201ENST00000501400 TMEM191CA6NGB0 347 aa19.33■□□□□ 0.69
LINC00535-201ENST00000501400 CARSP49589 748 aaKnown RBP19.33■□□□□ 0.69
LINC00535-201ENST00000501400 TAS2R40P59535 323 aa19.33■□□□□ 0.69
LINC00535-201ENST00000501400 CBX1P83916 185 aa19.33■□□□□ 0.69
LINC00535-201ENST00000501400 SOX4Q06945 474 aaPredicted RBP19.33■□□□□ 0.69
LINC00535-201ENST00000501400 TRADDQ15628 312 aa19.33■□□□□ 0.69
LINC00535-201ENST00000501400 KCTD19Q17RG1 926 aaPredicted RBP19.33■□□□□ 0.69
LINC00535-201ENST00000501400 ERICH1Q86X53 443 aa19.33■□□□□ 0.69
LINC00535-201ENST00000501400 DDX27Q96GQ7 796 aaKnown RBP19.33■□□□□ 0.69
LINC00535-201ENST00000501400 PARP2Q9UGN5 583 aa19.33■□□□□ 0.69
LINC00535-201ENST00000501400 AMACRQ9UHK6 382 aa19.33■□□□□ 0.69
LINC00535-201ENST00000501400 SNX9Q9Y5X1 595 aa19.33■□□□□ 0.69
LINC00535-201ENST00000501400 TCRBV7S2A1N4TA0A589 114 aa19.33■□□□□ 0.68
LINC00535-201ENST00000501400 VDRP11473 427 aa19.33■□□□□ 0.68
LINC00535-201ENST00000501400 MAN1A1P33908 653 aa19.33■□□□□ 0.68
LINC00535-201ENST00000501400 OGDHQ02218 1023 aa19.33■□□□□ 0.68
LINC00535-201ENST00000501400 SIX1Q15475 284 aaPredicted RBP19.33■□□□□ 0.68
LINC00535-201ENST00000501400 TWF2Q6IBS0 349 aaKnown RBP19.33■□□□□ 0.68
LINC00535-201ENST00000501400 DNAJC24Q6P3W2 148 aa19.33■□□□□ 0.68
LINC00535-201ENST00000501400 RPAINQ86UA6 219 aa19.33■□□□□ 0.68
LINC00535-201ENST00000501400 REM2Q8IYK8 340 aaPredicted RBP19.33■□□□□ 0.68
LINC00535-201ENST00000501400 C3orf20Q8ND61 904 aa19.33■□□□□ 0.68
LINC00535-201ENST00000501400 GDAP1L1Q96MZ0 367 aa19.33■□□□□ 0.68
LINC00535-201ENST00000501400 MCEEQ96PE7 176 aa19.33■□□□□ 0.68
LINC00535-201ENST00000501400 CPXM1Q96SM3 734 aa19.33■□□□□ 0.68
LINC00535-201ENST00000501400 OSBPL7Q9BZF2 842 aa19.33■□□□□ 0.68
LINC00535-201ENST00000501400 M0QZ92 97 aa19.32■□□□□ 0.68
LINC00535-201ENST00000501400 PIRO00625 290 aa19.32■□□□□ 0.68
LINC00535-201ENST00000501400 CLUL1Q15846 466 aa19.32■□□□□ 0.68
LINC00535-201ENST00000501400 SLC13A5Q86YT5 568 aaPredicted RBP19.32■□□□□ 0.68
LINC00535-201ENST00000501400 IFT20Q8IY31 132 aa19.32■□□□□ 0.68
LINC00535-201ENST00000501400 PRELID2Q8N945 189 aa19.32■□□□□ 0.68
LINC00535-201ENST00000501400 GOLGA2P5Q9HBQ8 144 aa19.32■□□□□ 0.68
LINC00535-201ENST00000501400 CREBZFQ9NS37 354 aa19.32■□□□□ 0.68
LINC00535-201ENST00000501400 ST3GAL5Q9UNP4 418 aa19.32■□□□□ 0.68
LINC00535-201ENST00000501400 FRMPD3Q5JV73 1810 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 M0QYV0 167 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 PTGESO14684 152 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 TRPA1O75762 1119 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 HMGCRP04035 888 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 MYCNP04198 464 aaPredicted RBP19.31■□□□□ 0.68
LINC00535-201ENST00000501400 GSCP56915 257 aaPredicted RBP19.31■□□□□ 0.68
LINC00535-201ENST00000501400 CNGA2Q16280 664 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 SGO2Q562F6 1265 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 TTC39CQ8N584 583 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.31■□□□□ 0.68
LINC00535-201ENST00000501400 NT5C1AQ9BXI3 368 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 MEIS3P2A8K0S8 358 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 SPTLC1O15269 473 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 TTI1O43156 1089 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 PSTPIP1O43586 416 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 RPS6KA5O75582 802 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 ERBB2P04626 1255 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 HSPA6P17066 643 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 GPD2P43304 727 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 TNNT3P45378 269 aaPredicted RBP19.31■□□□□ 0.68
LINC00535-201ENST00000501400 EPHB4P54760 987 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 RSPH3Q86UC2 560 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 HEXIM2Q96MH2 286 aaKnown RBP19.31■□□□□ 0.68
LINC00535-201ENST00000501400 HERPUD2Q9BSE4 406 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 ST7Q9NRC1 585 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 IP6K2Q9UHH9 426 aa19.31■□□□□ 0.68
LINC00535-201ENST00000501400 GOLGA6L10A0A0M3HER8 536 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 PHF2O75151 1096 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 CD4P01730 458 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 TCF4P15884 667 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 ECHS1P30084 290 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 PDCLQ13371 301 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 SOWAHAQ2M3V2 549 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 FBXO47Q5MNV8 452 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 XYLT1Q86Y38 959 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 C12orf29Q8N999 325 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 TSPAN18Q96SJ8 248 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 AGO3Q9H9G7 860 aaKnown RBP19.3■□□□□ 0.68
LINC00535-201ENST00000501400 DDX20Q9UHI6 824 aaKnown RBP19.3■□□□□ 0.68
LINC00535-201ENST00000501400 TSPAN16Q9UKR8 245 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 STRIP2Q9ULQ0 834 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 NFU1Q9UMS0 254 aa19.3■□□□□ 0.68
LINC00535-201ENST00000501400 CYP1B1Q16678 543 aa19.29■□□□□ 0.68
LINC00535-201ENST00000501400 LCLAT1Q6UWP7 414 aa19.29■□□□□ 0.68
LINC00535-201ENST00000501400 KBTBD7Q8WVZ9 684 aa19.29■□□□□ 0.68
LINC00535-201ENST00000501400 ZFP42Q96MM3 310 aa19.29■□□□□ 0.68
LINC00535-201ENST00000501400 HCRTO43612 131 aa19.29■□□□□ 0.68
LINC00535-201ENST00000501400 PFKMP08237 780 aa19.29■□□□□ 0.68
LINC00535-201ENST00000501400 GABRB2P47870 512 aa19.29■□□□□ 0.68
LINC00535-201ENST00000501400 TAP1Q03518 808 aa19.29■□□□□ 0.68
LINC00535-201ENST00000501400 NFX1Q12986 1120 aaKnown RBP19.29■□□□□ 0.68
LINC00535-201ENST00000501400 PAK2Q13177 524 aa19.29■□□□□ 0.68
LINC00535-201ENST00000501400 PTGISQ16647 500 aa19.29■□□□□ 0.68
LINC00535-201ENST00000501400 TTC27Q6P3X3 843 aa19.29■□□□□ 0.68
LINC00535-201ENST00000501400 EMBQ6PCB8 327 aa19.29■□□□□ 0.68
LINC00535-201ENST00000501400 SND1Q7KZF4 910 aaKnown RBP eCLIP19.29■□□□□ 0.68
LINC00535-201ENST00000501400 DPH6Q7L8W6 267 aa19.29■□□□□ 0.68
LINC00535-201ENST00000501400 RHOT1Q8IXI2 618 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms