RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 DRICH1Q6PGQ1 229 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-204ENST00000501271 CDR2LQ86X02 465 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-204ENST00000501271 FUKQ8N0W3 1084 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 TMEM130Q8N3G9 435 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 CEP120Q8N960 986 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 SPATC1LQ9H0A9 340 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 XYLT2Q9H1B5 865 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 SAYSD1Q9NPB0 183 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 TJP2Q9UDY2 1190 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 SLC12A4Q9UP95 1085 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 LRRD1A4D1F6 860 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 DNAJC8O75937 253 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-204ENST00000501271 PECAM1P16284 738 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-204ENST00000501271 GCAP28676 217 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 CDKN2BP42772 138 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 RAP1GAPP47736 663 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 MNAT1P51948 309 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 OSTNP61366 133 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 LMNB2Q03252 620 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 GPS1Q13098 491 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 XRCC4Q13426 336 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 TRPC3Q13507 836 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 STAT4Q14765 748 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 OASLQ15646 514 aaKnown RBP10.41□□□□□ -0.74
CLIP1-204ENST00000501271 MAPK6Q16659 721 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 ZNF699Q32M78 642 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 WDR72Q3MJ13 1102 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 HP1BP3Q5SSJ5 553 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-204ENST00000501271 NUGGCQ68CJ6 796 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 CYB5D1Q6P9G0 228 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 TRPM8Q7Z2W7 1104 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 THNSL1Q8IYQ7 743 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 TRAPPC12Q8WVT3 735 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 CKAP2Q8WWK9 683 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 ZBTB10Q96DT7 871 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 GPR20Q99678 358 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 PCDHGC3Q9UN70 934 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 POLIQ9UNA4 740 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 PPP2R3BQ9Y5P8 575 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.41□□□□□ -0.74
CLIP1-204ENST00000501271 B4GALT5O43286 388 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 ABHD2P08910 425 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 PROZP22891 400 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 EIF4BP23588 611 aaKnown RBP10.4□□□□□ -0.74
CLIP1-204ENST00000501271 PTPN7P35236 360 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 VCPP55072 806 aaKnown RBP10.4□□□□□ -0.74
CLIP1-204ENST00000501271 PIGHQ14442 188 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-204ENST00000501271 TMED2Q15363 201 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 ZKSCAN8Q15776 578 aaPredicted RBP10.4□□□□□ -0.74
CLIP1-204ENST00000501271 PTPN20Q4JDL3 420 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 TFDP3Q5H9I0 405 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 DENND1BQ6P3S1 775 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 ERICH1Q86X53 443 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 RHPN2Q8IUC4 686 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 ZBTB8OSQ8IWT0 167 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 NIPA2Q8N8Q9 360 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 CCHCR1Q8TD31 782 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 FAM167AQ96KS9 214 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 TMEM121Q9BTD3 319 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 ZNF518BQ9C0D4 1074 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 CYTH4Q9UIA0 394 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 GGT7Q9UJ14 662 aa10.4□□□□□ -0.74
CLIP1-204ENST00000501271 IGKV6-21A0A0C4DH24 114 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 C3orf70A6NLC5 250 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-204ENST00000501271 GOLGA8SH3BPF8 625 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 PGK2P07205 417 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 TGFB3P10600 412 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 RFC1P35251 1148 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-204ENST00000501271 COPS2P61201 443 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 MXD4Q14582 209 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-204ENST00000501271 SMTNL2Q2TAL5 461 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 FAM133BQ5BKY9 247 aaKnown RBP10.39□□□□□ -0.75
CLIP1-204ENST00000501271 RNASEH2BQ5TBB1 312 aaKnown RBP10.39□□□□□ -0.75
CLIP1-204ENST00000501271 EEF1DP3Q658K8 133 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 MPZL3Q6UWV2 235 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 TMEM192Q8IY95 271 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 ARFGAP1Q8N6T3 406 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 JOSD2Q8TAC2 188 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 TCP11Q8WWU5 503 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 MAML1Q92585 1016 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 SGSM3Q96HU1 749 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 FGD4Q96M96 766 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 FOXP3Q9BZS1 431 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 CD248Q9HCU0 757 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 PTPRHQ9HD43 1115 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 NXF1Q9UBU9 619 aaKnown RBP10.39□□□□□ -0.75
CLIP1-204ENST00000501271 TPX2Q9ULW0 747 aaKnown RBP10.39□□□□□ -0.75
CLIP1-204ENST00000501271 USP15Q9Y4E8 981 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-204ENST00000501271 EXOC1LA0A1B0GW35 172 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 RASA4BC9J798 803 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 RASA4O43374 803 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 LGR5O75473 907 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 GSTA1P08263 222 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 IL1R2P27930 398 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 STX2P32856 288 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 SLC25A11Q02978 314 aaKnown RBP10.39□□□□□ -0.75
CLIP1-204ENST00000501271 TAP1Q03518 808 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 ORC1Q13415 861 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 CCDC142Q17RM4 750 aa10.39□□□□□ -0.75
CLIP1-204ENST00000501271 CGB2Q6NT52 195 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms