RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 ELMO3Q96BJ8 720 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 BCO2Q9BYV7 579 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 NIF3L1Q9GZT8 377 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 SNX25Q9H3E2 840 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 SMYD3Q9H7B4 428 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 APOBEC3GQ9HC16 384 aaKnown RBP16.65■□□□□ 0.26
CPNE1-228ENST00000498814 ZDHHC7Q9NXF8 308 aa16.65■□□□□ 0.26
CPNE1-228ENST00000498814 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 KCNJ18B7U540 433 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 HNRNPA1P09651 372 aaKnown RBP eCLIP16.64■□□□□ 0.25
CPNE1-228ENST00000498814 LMO2P25791 158 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 ELF1P32519 619 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 ADCY1Q08828 1119 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 SMAD4Q13485 552 aaKnown RBP16.64■□□□□ 0.25
CPNE1-228ENST00000498814 KCNJ12Q14500 433 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 CLUL1Q15846 466 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 MAN2A1Q16706 1144 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 TCP11X2Q5H9J9 407 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 INTS6LQ5JSJ4 861 aaKnown RBP16.64■□□□□ 0.25
CPNE1-228ENST00000498814 CYP26C1Q6V0L0 522 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 LRRTM3Q86VH5 581 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 C12orf76Q8N812 135 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-228ENST00000498814 PKMYT1Q99640 499 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 RHOBTB2Q9BYZ6 727 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 SDCBP2Q9H190 292 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 ADAM7Q9H2U9 754 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 CYP3A43Q9HB55 503 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.64■□□□□ 0.25
CPNE1-228ENST00000498814 FANCLQ9NW38 375 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 HSFX1Q9UBD0 423 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 CDH9Q9ULB4 789 aa16.64■□□□□ 0.25
CPNE1-228ENST00000498814 MTMR11A4FU01 709 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 MBTPS2O43462 519 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 SEC24AO95486 1093 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 VNN2O95498 520 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 C8AP07357 584 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 ACAT1P24752 427 aaKnown RBP16.63■□□□□ 0.25
CPNE1-228ENST00000498814 HOXA9P31269 272 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 CDH8P55286 799 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 NCAPHQ15003 741 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 NFE2Q16621 373 aaPredicted RBP16.63■□□□□ 0.25
CPNE1-228ENST00000498814 SLC39A12Q504Y0 691 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 HSP90AA4PQ58FG1 418 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 RARS2Q5T160 578 aaKnown RBP16.63■□□□□ 0.25
CPNE1-228ENST00000498814 CES5AQ6NT32 575 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 SCARA5Q6ZMJ2 495 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.63■□□□□ 0.25
CPNE1-228ENST00000498814 OR6B3Q8NGW1 331 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 LMO3Q8TAP4 145 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 SLC7A14Q8TBB6 771 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 C2orf15Q8WU43 125 aaKnown RBP16.63■□□□□ 0.25
CPNE1-228ENST00000498814 ASB2Q96Q27 587 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 TUBGCP2Q9BSJ2 902 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 FAM124BQ9H5Z6 455 aaPredicted RBP16.63■□□□□ 0.25
CPNE1-228ENST00000498814 CYP4F11Q9HBI6 524 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 NME7Q9Y5B8 376 aa16.63■□□□□ 0.25
CPNE1-228ENST00000498814 PTPRDP23468 1912 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 DOCK6Q96HP0 2047 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 CCDC195A0A1B0GUA6 201 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 GTPBP10A4D1E9 387 aaKnown RBP16.62■□□□□ 0.25
CPNE1-228ENST00000498814 GRXCR2A6NFK2 248 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 A8MXQ7 604 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 PRRG1O14668 218 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 HCRTO43612 131 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 RFPL2O75678 378 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 POU2F2P09086 479 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 PDGFRBP09619 1106 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 WEE2P0C1S8 567 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 PRKCSHP14314 528 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-228ENST00000498814 RAP1GAPP47736 663 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 ZNF165P49910 485 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 PPM1LQ5SGD2 360 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 PTCRAQ6ISU1 281 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-228ENST00000498814 FAM171BQ6P995 826 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 TMC5Q6UXY8 1006 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 GPR149Q86SP6 731 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 UNC93AQ86WB7 457 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 EHBP1Q8NDI1 1231 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 SPPL2BQ8TCT7 592 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 SUSD6Q92537 303 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 TATDN2Q93075 761 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 ZNF707Q96C28 371 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-228ENST00000498814 PGLYRP2Q96PD5 576 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 SYT15Q9BQS2 421 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 APOL5Q9BWW9 433 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 PRKD2Q9BZL6 878 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 FAM50BQ9Y247 325 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 USP15Q9Y4E8 981 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-228ENST00000498814 UNC80Q8N2C7 3258 aa16.62■□□□□ 0.25
CPNE1-228ENST00000498814 MYBPHLA2RUH7 354 aa16.61■□□□□ 0.25
CPNE1-228ENST00000498814 SMTNL1A8MU46 457 aa16.61■□□□□ 0.25
CPNE1-228ENST00000498814 ATP2C2O75185 946 aa16.61■□□□□ 0.25
CPNE1-228ENST00000498814 CAVIN2O95810 425 aa16.61■□□□□ 0.25
CPNE1-228ENST00000498814 ZNF18P17022 549 aa16.61■□□□□ 0.25
CPNE1-228ENST00000498814 KCNQ1P51787 676 aa16.61■□□□□ 0.25
CPNE1-228ENST00000498814 INCA1Q0VD86 236 aa16.61■□□□□ 0.25
CPNE1-228ENST00000498814 DUSP4Q13115 394 aa16.61■□□□□ 0.25
CPNE1-228ENST00000498814 MAPRE1Q15691 268 aaKnown RBP16.61■□□□□ 0.25
CPNE1-228ENST00000498814 VWA3BQ502W6 1294 aa16.61■□□□□ 0.25
CPNE1-228ENST00000498814 MIIPQ5JXC2 388 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms