RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 OR6C75A6NL08 312 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 TULP1O00294 542 aaPredicted RBP9.91□□□□□ -0.82
CCDC171-209ENST00000498725 ABLIM1O14639 778 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 KHNYNO15037 678 aaKnown RBP9.91□□□□□ -0.82
CCDC171-209ENST00000498725 HYAL3O43820 417 aaPredicted RBP9.91□□□□□ -0.82
CCDC171-209ENST00000498725 AKAP3O75969 853 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 OAZ2O95190 189 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 FGF19O95750 216 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 PROZP22891 400 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 TNFSF9P41273 254 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 DHPSP49366 369 aaPredicted RBP9.91□□□□□ -0.82
CCDC171-209ENST00000498725 BFSP1Q12934 665 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 STRN3Q13033 797 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 DMC1Q14565 340 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 VEPH1Q14D04 833 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 HAUS3Q68CZ6 603 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 LRSAM1Q6UWE0 723 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 CMTM8Q8IZV2 173 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 DAW1Q8N136 415 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 CAMKK1Q8N5S9 505 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 SNX29Q8TEQ0 813 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 GATA6Q92908 595 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 BICD1Q96G01 975 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 RUSC1Q9BVN2 902 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 LRWD1Q9UFC0 647 aa9.91□□□□□ -0.82
CCDC171-209ENST00000498725 MAGED2Q9UNF1 606 aaPredicted RBP9.91□□□□□ -0.82
CCDC171-209ENST00000498725 HELZP42694 1942 aaKnown RBP9.91□□□□□ -0.82
CCDC171-209ENST00000498725 TNRC6BQ9UPQ9 1833 aaKnown RBP9.91□□□□□ -0.82
CCDC171-209ENST00000498725 SCN1AP35498 2009 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 PTPRDP23468 1912 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 ADAMTS20P59510 1910 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 PP2D1A8MPX8 630 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 LACTBL1A8MY62 500 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 TRDMT1O14717 391 aaKnown RBP9.9□□□□□ -0.82
CCDC171-209ENST00000498725 CLDN3O15551 220 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 ZZEF1O43149 2961 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 APBB3O95704 486 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 ATF6P18850 670 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 BCKDHBP21953 392 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 CDC25CP30307 473 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 AVPR1AP37288 418 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 MAPK8P45983 427 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 SEC13P55735 322 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 IRX4P78413 519 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 PPP2R3AQ06190 1150 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 NBR1Q14596 966 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 ZRSR1Q15695 479 aaKnown RBP9.9□□□□□ -0.82
CCDC171-209ENST00000498725 ME3Q16798 604 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 CC2D1AQ6P1N0 951 aaPredicted RBP9.9□□□□□ -0.82
CCDC171-209ENST00000498725 ARMCX6Q7L4S7 300 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 CYP2U1Q7Z449 544 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 NSUN7Q8NE18 718 aaKnown RBP9.9□□□□□ -0.82
CCDC171-209ENST00000498725 PIGKQ92643 395 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 USP13Q92995 863 aaPredicted RBP9.9□□□□□ -0.82
CCDC171-209ENST00000498725 SENP8Q96LD8 212 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 P2RY13Q9BPV8 354 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 FAM83CQ9BQN1 747 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 TMEM121BQ9BXQ6 578 aaPredicted RBP9.9□□□□□ -0.82
CCDC171-209ENST00000498725 HAPLN2Q9GZV7 340 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 IL21Q9HBE4 155 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 ARHGAP28Q9P2N2 729 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 WASF3Q9UPY6 502 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 CEP295Q9C0D2 2601 aa9.9□□□□□ -0.82
CCDC171-209ENST00000498725 ATRXP46100 2492 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 SPAARA0A1B0GVQ0 90 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 TMEM8BA6NDV4 472 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 ANTXRLA6NF34 631 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 CDX4O14627 284 aaPredicted RBP9.89□□□□□ -0.83
CCDC171-209ENST00000498725 TOM1L1O75674 476 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 ODC1P11926 461 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 CEACAM1P13688 526 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 DRD1P21728 446 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 CDC25AP30304 524 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 GJA4P35212 333 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 MAPK7Q13164 816 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 GNL2Q13823 731 aaKnown RBP9.89□□□□□ -0.83
CCDC171-209ENST00000498725 MYBPC2Q14324 1141 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 KARSQ15046 597 aaKnown RBP9.89□□□□□ -0.83
CCDC171-209ENST00000498725 SAFBQ15424 915 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCDC171-209ENST00000498725 TTC38Q5R3I4 469 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 SDHAF4Q5VUM1 108 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 TXNDC8Q6A555 127 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 C19orf48Q6RUI8 117 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 TSTD1Q8NFU3 115 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 OR10T2Q8NGX3 314 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 RIN3Q8TB24 985 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 DRC1Q96MC2 740 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 OXCT2Q9BYC2 517 aaPredicted RBP9.89□□□□□ -0.83
CCDC171-209ENST00000498725 TRPC7Q9HCX4 862 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 TDP1Q9NUW8 608 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 ABI2Q9NYB9 513 aaPredicted RBP9.89□□□□□ -0.83
CCDC171-209ENST00000498725 KLK13Q9UKR3 277 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 UBQLN1Q9UMX0 589 aaKnown RBP9.89□□□□□ -0.83
CCDC171-209ENST00000498725 DNM3Q9UQ16 869 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
CCDC171-209ENST00000498725 ANAPC1Q9H1A4 1944 aa9.89□□□□□ -0.83
CCDC171-209ENST00000498725 ATXN2Q99700 1313 aaKnown RBP9.88□□□□□ -0.83
CCDC171-209ENST00000498725 NBEAQ8NFP9 2946 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 TTC26A0AVF1 554 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 SOBPA7XYQ1 873 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms