RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 POLR2MP0CAP2 368 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 FERP16591 822 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 MAN2A2P49641 1150 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 PRELPP51888 382 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 SKOR1P84550 965 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 PRPF4BQ13523 1007 aaKnown RBP9.49□□□□□ -0.89
FN1-227ENST00000498719 IFI16Q16666 785 aaKnown RBP9.49□□□□□ -0.89
FN1-227ENST00000498719 CEP55Q53EZ4 464 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 CCBE1Q6UXH8 406 aaPredicted RBP9.49□□□□□ -0.89
FN1-227ENST00000498719 MIGA2Q7L4E1 593 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 DAW1Q8N136 415 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 LXNQ9BS40 222 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 ZNF577Q9BSK1 485 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 TSPYL1Q9H0U9 437 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 THAP2Q9H0W7 228 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 SPEF1Q9Y4P9 236 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 FRMPD4Q14CM0 1322 aa9.49□□□□□ -0.89
FN1-227ENST00000498719 FOXN3O00409 490 aaPredicted RBP9.48□□□□□ -0.89
FN1-227ENST00000498719 CES2O00748 559 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 PLD2O14939 933 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 P4HA2O15460 535 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 BRINP1O60477 761 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 FGGP02679 453 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 NR1D1P20393 614 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 HSPA1LP34931 641 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 HSPA9P38646 679 aaKnown RBP9.48□□□□□ -0.89
FN1-227ENST00000498719 MAGEA9P43362 315 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 SEC24CP53992 1094 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 CAMK2GQ13555 558 aaPredicted RBP9.48□□□□□ -0.89
FN1-227ENST00000498719 SLC14A2Q15849 920 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 SLC15A2Q16348 729 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 AADACL2Q6P093 401 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 TLDC1Q6P9B6 456 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 B3GNT9Q6UX72 402 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 BNC2Q6ZN30 1099 aaPredicted RBP9.48□□□□□ -0.89
FN1-227ENST00000498719 PACS2Q86VP3 889 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 GALNT13Q8IUC8 556 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 SLC20A1Q8WUM9 679 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 HDAC2Q92769 488 aaKnown RBP9.48□□□□□ -0.89
FN1-227ENST00000498719 HES6Q96HZ4 224 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 TRIM51Q9BSJ1 452 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 STK33Q9BYT3 514 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 INTS2Q9H0H0 1204 aaKnown RBP9.48□□□□□ -0.89
FN1-227ENST00000498719 DPH5Q9H2P9 285 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 SUCLA2Q9P2R7 463 aaPredicted RBP9.48□□□□□ -0.89
FN1-227ENST00000498719 COG5Q9UP83 839 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 SLC27A5Q9Y2P5 690 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 PCDHB3Q9Y5E6 796 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 TMEM150BA6NC51 233 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 H0YIN7 160 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 EBAG9O00559 213 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 NDUFAB1O14561 156 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 EXOC3O60645 756 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 KPNA6O60684 536 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 SNUPNO95149 360 aaKnown RBP9.48□□□□□ -0.89
FN1-227ENST00000498719 LSP1P33241 339 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 GTF2H3Q13889 308 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 LLGL1Q15334 1064 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 SNAP47Q5SQN1 464 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 CHST15Q7LFX5 561 aaPredicted RBP9.48□□□□□ -0.89
FN1-227ENST00000498719 SYCP3Q8IZU3 236 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 RADILQ96JH8 1075 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 ATP6V1G3Q96LB4 118 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 SYT11Q9BT88 431 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 APEX2Q9UBZ4 518 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 FAM169AQ9Y6X4 670 aa9.48□□□□□ -0.89
FN1-227ENST00000498719 A0A0A6YYK5 440 aaPredicted RBP9.47□□□□□ -0.89
FN1-227ENST00000498719 H0YGN5 161 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 ENTPD3O75355 529 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 LTFP02788 710 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 CYP11A1P05108 521 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 GRK2P25098 689 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 LIG3P49916 1009 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 FKBP1AP62942 108 aaKnown RBP9.47□□□□□ -0.89
FN1-227ENST00000498719 MYL7Q01449 175 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 SLC20A2Q08357 652 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 BFSP1Q12934 665 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 MAPK7Q13164 816 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 SWT1Q5T5J6 900 aaKnown RBP9.47□□□□□ -0.89
FN1-227ENST00000498719 KDM7AQ6ZMT4 941 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 CD302Q8IX05 232 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 IQCF2Q8IXL9 164 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 RASGEF1CQ8N431 466 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 IL31RAQ8NI17 732 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 UBLCP1Q8WVY7 318 aaPredicted RBP9.47□□□□□ -0.89
FN1-227ENST00000498719 RFFLQ8WZ73 363 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 NACC1Q96RE7 527 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 TBCBQ99426 244 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 ERVK-5Q9HDB9 667 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 ACP6Q9NPH0 428 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 DMAC2Q9NW81 257 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 PIH1D1Q9NWS0 290 aaKnown RBP9.47□□□□□ -0.89
FN1-227ENST00000498719 TMOD4Q9NZQ9 345 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 HERC5Q9UII4 1024 aaKnown RBP9.47□□□□□ -0.89
FN1-227ENST00000498719 AMFRQ9UKV5 643 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 NFS1Q9Y697 457 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 DCDC2CA8MYV0 355 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 RAD17O75943 681 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 TPPPO94811 219 aa9.47□□□□□ -0.89
FN1-227ENST00000498719 ITGB5P18084 799 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms