RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 MCOLN2Q8IZK6 566 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 SYCE1Q8N0S2 351 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 PDCL2Q8N4E4 241 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 MSANTD4Q8NCY6 345 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 C1orf131Q8NDD1 294 aaKnown RBP7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 TPCN2Q8NHX9 752 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 UBA3Q8TBC4 463 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 ARHGEF26Q96DR7 871 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 TNIP3Q96KP6 325 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 CALR3Q96L12 384 aaKnown RBP7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 SENP8Q96LD8 212 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 ZSWIM1Q9BR11 485 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 PAAF1Q9BRP4 392 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 C11orf70Q9BRQ4 267 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 TUBB2BQ9BVA1 445 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 NUP85Q9BW27 656 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 ZNF518BQ9C0D4 1074 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 LHX5Q9H2C1 402 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 SYNCQ9H7C4 482 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 HESX1Q9UBX0 185 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 CNOT8Q9UFF9 292 aaKnown RBP7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 GTF3C4Q9UKN8 822 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 TBX21Q9UL17 535 aa7.55□□□□□ -1.2
GPATCH4-209ENST00000498641 ARHGEF37A1IGU5 675 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 GRID2IPA4D2P6 1211 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 I3L4J1 428 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 O00370 1275 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 FANCGO15287 622 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 INPPL1O15357 1258 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 NCK2O43639 380 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 UPP2O95045 317 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 FTCDO95954 541 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 TIMP1P01033 207 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 CALB1P05937 261 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 ODC1P11926 461 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 RAG1P15918 1043 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 IGFBP6P24592 240 aaPredicted RBP7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 LMO2P25791 158 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 OR1G1P47890 313 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 LHX1P48742 406 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 TCEAL1Q15170 157 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 TCTN1Q2MV58 587 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 GOLGA7BQ2TAP0 167 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 PAN2Q504Q3 1202 aaKnown RBP7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 C2CD6Q53TS8 623 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 WSCD1Q658N2 575 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 CNKSR3Q6P9H4 555 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 LCLAT1Q6UWP7 414 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 MON1BQ7L1V2 547 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 PEX26Q7Z412 305 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 ZNF280BQ86YH2 543 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 CRYBG2Q8N1P7 616 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 TMEM86AQ8N2M4 240 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 TMEM199Q8N511 208 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 C12orf29Q8N999 325 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 ZNF564Q8TBZ8 553 aaPredicted RBP7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 HASPINQ8TF76 798 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 KBTBD7Q8WVZ9 684 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 VCPIP1Q96JH7 1222 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 MCOLN1Q9GZU1 580 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 DPEP3Q9H4B8 488 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 MRPL47Q9HD33 250 aaKnown RBP7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 OSGEPQ9NPF4 335 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 FAM49BQ9NUQ9 324 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 TBC1D13Q9NVG8 400 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 DDX43Q9NXZ2 648 aaKnown RBP7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 UVRAGQ9P2Y5 699 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 CHORDC1Q9UHD1 332 aaPredicted RBP7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 DSEQ9UL01 958 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 STXBP5LQ9Y2K9 1186 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 PCDHGC5Q9Y5F6 944 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 TIMM13Q9Y5L4 95 aaPredicted RBP7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 SAR1BQ9Y6B6 198 aa7.54□□□□□ -1.2
GPATCH4-209ENST00000498641 FRMPD3Q5JV73 1810 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 TBKBP1A7MCY6 615 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 HCRTO43612 131 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 BUB1BO60566 1050 aaPredicted RBP7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 TADA2AO75478 443 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 DDHD2O94830 711 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 ALDH2P05091 517 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 PTPN1P18031 435 aaKnown RBP7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 MMP8P22894 467 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 RRM1P23921 792 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 ACAT1P24752 427 aaKnown RBP7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 ADORA2BP29275 332 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 CDH5P33151 784 aaPredicted RBP7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 BRCC3P46736 316 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 GATMP50440 423 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 DNA2P51530 1060 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 SLC8A3P57103 927 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 SNX16P57768 344 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 PSMC1P62191 440 aaKnown RBP7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 MESDQ14696 234 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 RPS6KA1Q15418 735 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 PTPROQ16827 1216 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 TIGD5Q53EQ6 642 aa7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 PPP1R26Q5T8A7 1209 aaPredicted RBP7.53□□□□□ -1.2
GPATCH4-209ENST00000498641 MEI1Q5TIA1 1274 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms