RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 OSTM1Q86WC4 334 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 ITFG1Q8TB96 612 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 FAM200AQ8TCP9 573 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 SPPL2BQ8TCT7 592 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 EEF2KMTQ96G04 330 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 SEPT5Q99719 369 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-213ENST00000498495 MKNK1Q9BUB5 465 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 CRISPLD1Q9H336 500 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 SNX25Q9H3E2 840 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 KCNK12Q9HB15 430 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 CEP72Q9P209 647 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 IGSF9Q9P2J2 1179 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 EPS15L1Q9UBC2 864 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 GTF3C4Q9UKN8 822 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 CDH7Q9ULB5 785 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 YIPF1Q9Y548 306 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 PCDHB5Q9Y5E4 795 aa13.72□□□□□ -0.21
HSPG2-213ENST00000498495 GPR37L1O60883 481 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 TACC1O75410 805 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 PDGFRBP09619 1106 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 MYL4P12829 197 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 WARSP23381 471 aaKnown RBP13.71□□□□□ -0.21
HSPG2-213ENST00000498495 LMO2P25791 158 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 LRRC63Q05C16 580 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 ENPEPQ07075 957 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 MTMR3Q13615 1198 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 MORC3Q14149 939 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 ZACNQ401N2 412 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 ZNF667Q5HYK9 610 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 INTS6LQ5JSJ4 861 aaKnown RBP13.71□□□□□ -0.21
HSPG2-213ENST00000498495 CLEC17AQ6ZS10 378 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 LIMS2Q7Z4I7 341 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 HS6ST3Q8IZP7 471 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 LEMD2Q8NC56 503 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 OR6B3Q8NGW1 331 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 FGF13Q92913 245 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 NXPE3Q969Y0 559 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 MMRN2Q9H8L6 949 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 AVENQ9NQS1 362 aaPredicted RBP13.71□□□□□ -0.21
HSPG2-213ENST00000498495 ABI2Q9NYB9 513 aaPredicted RBP13.71□□□□□ -0.21
HSPG2-213ENST00000498495 CDH9Q9ULB4 789 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 ASB3Q9Y575 518 aa13.71□□□□□ -0.21
HSPG2-213ENST00000498495 TRIM49BA6NDI0 452 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 PPP1R3GB7ZBB8 358 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 SOAT2O75908 522 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 VNN1O95497 513 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 TRIM49P0CI25 452 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 TRIM49CP0CI26 452 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 HAPLN1P10915 354 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-213ENST00000498495 P4HA1P13674 534 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 CD44P16070 742 aaKnown RBP13.7□□□□□ -0.22
HSPG2-213ENST00000498495 GCLMP48507 274 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 PMS1P54277 932 aaKnown RBP13.7□□□□□ -0.22
HSPG2-213ENST00000498495 TDGQ13569 410 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 VEPH1Q14D04 833 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 TAF12Q16514 161 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 ZNF699Q32M78 642 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 C1orf220Q5T0J3 134 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 KLHL10Q6JEL2 608 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 TRIM67Q6ZTA4 783 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 DNAJB7Q7Z6W7 309 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-213ENST00000498495 ITIH5Q86UX2 942 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 SPATA2LQ8IUW3 424 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-213ENST00000498495 UBALD2Q8IYN6 164 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 TTC9BQ8N6N2 239 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 KBTBD7Q8WVZ9 684 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 ING5Q8WYH8 240 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 TAF4BQ92750 862 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 MCRS1Q96EZ8 462 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 GBP4Q96PP9 640 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 SYT15Q9BQS2 421 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 MRPL45Q9BRJ2 306 aaKnown RBP13.7□□□□□ -0.22
HSPG2-213ENST00000498495 PI4K2AQ9BTU6 479 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 XYLT2Q9H1B5 865 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 VRTNQ9H8Y1 702 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 ASAH2Q9NR71 780 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 TMLHEQ9NVH6 421 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 KIAA1468Q9P260 1216 aa13.7□□□□□ -0.22
HSPG2-213ENST00000498495 C5orf42Q9H799 3197 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 BICDL2A1A5D9 508 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 MYBPHLA2RUH7 354 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 FAM86C2PA6NEL3 165 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 HCRTO43612 131 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 STX10O60499 249 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 ATP2C2O75185 946 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 MICAL2O94851 1124 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 HLA-DRAP01903 254 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 BMP6P22004 513 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 PIK3CAP42336 1068 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 PPP3CAQ08209 521 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 SIGLEC14Q08ET2 396 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 MAPRE1Q15691 268 aaKnown RBP13.69□□□□□ -0.22
HSPG2-213ENST00000498495 SLC5A9Q2M3M2 681 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 PRSS36Q5K4E3 855 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 KRT39Q6A163 491 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 FAM171BQ6P995 826 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 C4orf50Q6ZRC1 276 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 TRIML1Q8N9V2 468 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 CCDC150Q8NCX0 1101 aa13.69□□□□□ -0.22
HSPG2-213ENST00000498495 GIPC2Q8TF65 315 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms