RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 SOAT2O75908 522 aa5.17□□□□□ -1.58
SMC4-227ENST00000497984 CHEK2O96017 543 aa5.17□□□□□ -1.58
SMC4-227ENST00000497984 IGKV2-30P06310 120 aa5.17□□□□□ -1.58
SMC4-227ENST00000497984 MPGP29372 298 aa5.17□□□□□ -1.58
SMC4-227ENST00000497984 ZNF135P52742 658 aaPredicted RBP5.17□□□□□ -1.58
SMC4-227ENST00000497984 VPS53Q5VIR6 699 aa5.17□□□□□ -1.58
SMC4-227ENST00000497984 YTHDF3Q7Z739 585 aaKnown RBP5.17□□□□□ -1.58
SMC4-227ENST00000497984 DDX42Q86XP3 938 aaKnown RBP eCLIP5.17□□□□□ -1.58
SMC4-227ENST00000497984 KLHDC4Q8TBB5 520 aa5.17□□□□□ -1.58
SMC4-227ENST00000497984 FAM136AQ96C01 138 aa5.17□□□□□ -1.58
SMC4-227ENST00000497984 TEKT5Q96M29 485 aa5.17□□□□□ -1.58
SMC4-227ENST00000497984 CNPPD1Q9BV87 410 aa5.17□□□□□ -1.58
SMC4-227ENST00000497984 QTRT1Q9BXR0 403 aaKnown RBP5.17□□□□□ -1.58
SMC4-227ENST00000497984 BHMT2Q9H2M3 363 aa5.17□□□□□ -1.58
SMC4-227ENST00000497984 MAN1C1Q9NR34 630 aa5.17□□□□□ -1.58
SMC4-227ENST00000497984 CFAP20Q9Y6A4 193 aaKnown RBP5.17□□□□□ -1.58
SMC4-227ENST00000497984 IKBKBO14920 756 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 JTBO76095 146 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 CHRM3P20309 590 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 CERS1P27544 350 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 FXR1P51114 621 aaKnown RBP eCLIP5.16□□□□□ -1.58
SMC4-227ENST00000497984 SUPT20HL1Q3ZLR7 823 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 CEP78Q5JTW2 689 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 PPP1R32Q7Z5V6 425 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 ATRIPQ8WXE1 791 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 TBC1D5Q92609 795 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 NRIP3Q9NQ35 241 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 SH3BP4Q9P0V3 963 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 CFAP97Q9P2B7 532 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 MCM8Q9UJA3 840 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 ZNF521Q96K83 1311 aa5.16□□□□□ -1.58
SMC4-227ENST00000497984 H0YIZ8 118 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 XPOTO43592 962 aaKnown RBP5.15□□□□□ -1.59
SMC4-227ENST00000497984 NXPH3O95157 252 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 KIF20AO95235 890 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 PDHA1P08559 390 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 GNAI3P08754 354 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 NDUFB7P17568 137 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 ITGALP20701 1170 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 SFPQP23246 707 aaKnown RBP eCLIP5.15□□□□□ -1.59
SMC4-227ENST00000497984 CD6P30203 668 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 GNAI1P63096 354 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 KRT85P78386 507 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 TTC7BQ86TV6 843 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 FAM90A1Q86YD7 464 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 SH2D3AQ9BRG2 576 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 C1orf43Q9BWL3 253 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 PRKAB1Q9Y478 270 aa5.15□□□□□ -1.59
SMC4-227ENST00000497984 LRRC14BA6NHZ5 514 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 MYO1FO00160 1098 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 PPP6CO00743 305 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 PPM1DO15297 605 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 VPS4BO75351 444 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 BMP15O95972 392 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 RPLP2P05387 115 aaKnown RBP5.14□□□□□ -1.59
SMC4-227ENST00000497984 FAM163BP0C2L3 166 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 MYBL2P10244 700 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 RARBP10826 455 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 PRDX5P30044 214 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 BOP1Q14137 746 aaKnown RBP5.14□□□□□ -1.59
SMC4-227ENST00000497984 KIF22Q14807 665 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 PCBP2Q15366 365 aaKnown RBP eCLIP5.14□□□□□ -1.59
SMC4-227ENST00000497984 ABCB5Q2M3G0 1257 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 AARS2Q5JTZ9 985 aaKnown RBP5.14□□□□□ -1.59
SMC4-227ENST00000497984 ZNF618Q5T7W0 954 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 SYDE2Q5VT97 1194 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 PRAMEF17Q5VTA0 474 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 SLC9A4Q6AI14 798 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 SLC18B1Q6NT16 456 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 ANKRD16Q6P6B7 361 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 TINAGL1Q9GZM7 467 aaPredicted RBP5.14□□□□□ -1.59
SMC4-227ENST00000497984 GNL3LQ9NVN8 582 aaKnown RBP5.14□□□□□ -1.59
SMC4-227ENST00000497984 DLL3Q9NYJ7 618 aa5.14□□□□□ -1.59
SMC4-227ENST00000497984 ADAMTS3O15072 1205 aa5.13□□□□□ -1.59
SMC4-227ENST00000497984 TOP3BO95985 862 aaKnown RBP5.13□□□□□ -1.59
SMC4-227ENST00000497984 TUBB4AP04350 444 aa5.13□□□□□ -1.59
SMC4-227ENST00000497984 CYP2D6P10635 497 aa5.13□□□□□ -1.59
SMC4-227ENST00000497984 PHKA1P46020 1223 aa5.13□□□□□ -1.59
SMC4-227ENST00000497984 GCLCP48506 637 aaPredicted RBP5.13□□□□□ -1.59
SMC4-227ENST00000497984 PIK3CGP48736 1102 aa5.13□□□□□ -1.59
SMC4-227ENST00000497984 TEDDM1Q5T9Z0 273 aa5.13□□□□□ -1.59
SMC4-227ENST00000497984 SLC29A4Q7RTT9 530 aa5.13□□□□□ -1.59
SMC4-227ENST00000497984 MAVSQ7Z434 540 aa5.13□□□□□ -1.59
SMC4-227ENST00000497984 SLAMF7Q9NQ25 335 aa5.13□□□□□ -1.59
SMC4-227ENST00000497984 TRHDEQ9UKU6 1024 aa5.13□□□□□ -1.59
SMC4-227ENST00000497984 RAD54BQ9Y620 910 aa5.13□□□□□ -1.59
SMC4-227ENST00000497984 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.12□□□□□ -1.59
SMC4-227ENST00000497984 PRRT4C9JH25 899 aa5.12□□□□□ -1.59
SMC4-227ENST00000497984 TRIM38O00635 465 aa5.12□□□□□ -1.59
SMC4-227ENST00000497984 FTH1P19P0C7X4 201 aa5.12□□□□□ -1.59
SMC4-227ENST00000497984 ADKP55263 362 aaKnown RBP5.12□□□□□ -1.59
SMC4-227ENST00000497984 UAP1L1Q3KQV9 507 aa5.12□□□□□ -1.59
SMC4-227ENST00000497984 DTX2Q86UW9 622 aa5.12□□□□□ -1.59
SMC4-227ENST00000497984 DENND1AQ8TEH3 1009 aa5.12□□□□□ -1.59
SMC4-227ENST00000497984 TBC1D30Q9Y2I9 924 aa5.12□□□□□ -1.59
SMC4-227ENST00000497984 SMIM22K7EJ46 135 aa5.11□□□□□ -1.59
SMC4-227ENST00000497984 CLSTN1O94985 981 aa5.11□□□□□ -1.59
SMC4-227ENST00000497984 SMARCA1P28370 1054 aa5.11□□□□□ -1.59
SMC4-227ENST00000497984 LIPAP38571 399 aa5.11□□□□□ -1.59
SMC4-227ENST00000497984 ALDH9A1P49189 494 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms