RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 SPATA18Q8TC71 538 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 SPPL2BQ8TCT7 592 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 GPR152Q8TDT2 470 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 ERCC4Q92889 916 aaPredicted RBP16.47■□□□□ 0.23
NUP50-219ENST00000497960 CCDC127Q96BQ5 260 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 TCEAL4Q96EI5 215 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 HPDLQ96IR7 371 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 SEPT5Q99719 369 aaPredicted RBP16.47■□□□□ 0.23
NUP50-219ENST00000497960 NUP62CLQ9H1M0 184 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 CLSTN2Q9H4D0 955 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 SLC2A4RGQ9NR83 387 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 RMND1Q9NWS8 449 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 L1RE1Q9UN81 338 aa16.47■□□□□ 0.23
NUP50-219ENST00000497960 PTPRJQ12913 1337 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 KIF20AO95235 890 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 CCR2P41597 374 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 CLCN5P51795 746 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 NUBP1P53384 320 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 NFE2Q16621 373 aaPredicted RBP16.46■□□□□ 0.23
NUP50-219ENST00000497960 TRAPPC11Q7Z392 1133 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 LRRTM3Q86VH5 581 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 ELOA2Q8IYF1 753 aaPredicted RBP16.46■□□□□ 0.23
NUP50-219ENST00000497960 TTC9BQ8N6N2 239 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 FAM200AQ8TCP9 573 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 CGRRF1Q99675 332 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 KXD1Q9BQD3 176 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 ACBD6Q9BR61 282 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 DNAJC25Q9H1X3 360 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 DDX43Q9NXZ2 648 aaKnown RBP16.46■□□□□ 0.23
NUP50-219ENST00000497960 ABI2Q9NYB9 513 aaPredicted RBP16.46■□□□□ 0.23
NUP50-219ENST00000497960 CA14Q9ULX7 337 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 CACNA1HO95180 2353 aa16.46■□□□□ 0.23
NUP50-219ENST00000497960 ECI2O75521 394 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 SOAT2O75908 522 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 RHOBTB3O94955 611 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 FGF19O95750 216 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 PCSK1P29120 753 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 LHX1P48742 406 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 PTPN5P54829 565 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 GPC5P78333 572 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 PFKPQ01813 784 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 KCNB1Q14721 858 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 TAF12Q16514 161 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 SCARA3Q6AZY7 606 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 DPH6Q7L8W6 267 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 DNAJB7Q7Z6W7 309 aaPredicted RBP16.45■□□□□ 0.22
NUP50-219ENST00000497960 ADGRF2Q8IZF7 708 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 PSMG2Q969U7 264 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 GPR88Q9GZN0 384 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 SLITRK6Q9H5Y7 841 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 ZFP14Q9HCL3 533 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 PCDHB5Q9Y5E4 795 aa16.45■□□□□ 0.22
NUP50-219ENST00000497960 KRBA1A5PL33 1030 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 PDXKO00764 312 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 HAPLN1P10915 354 aaPredicted RBP16.44■□□□□ 0.22
NUP50-219ENST00000497960 GJA1P17302 382 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 NPR3P17342 541 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 CDR1P51861 262 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 TRPC3Q13507 836 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 TEAD2Q15562 447 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 INTS6LQ5JSJ4 861 aaKnown RBP16.44■□□□□ 0.22
NUP50-219ENST00000497960 FAM78AQ5JUQ0 283 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 SLC9A9Q8IVB4 645 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 TMEM105Q8N8V8 129 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 SMARCD2Q92925 531 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 ELSPBP1Q96BH3 223 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 GSDMAQ96QA5 445 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 ARHGEF3Q9NR81 526 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 PCDHA5Q9Y5H7 936 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 TSC2P49815 1807 aa16.44■□□□□ 0.22
NUP50-219ENST00000497960 A0A1W2PRU2 124 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 CALUO43852 315 aaPredicted RBP16.43■□□□□ 0.22
NUP50-219ENST00000497960 PHACTR2O75167 634 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 MOSPD3O75425 235 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 NR3C1P04150 777 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 AOC1P19801 751 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 ACAT1P24752 427 aaKnown RBP16.43■□□□□ 0.22
NUP50-219ENST00000497960 AP3M2P53677 418 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 SOWAHAQ2M3V2 549 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 CWF19L1Q69YN2 538 aaKnown RBP16.43■□□□□ 0.22
NUP50-219ENST00000497960 TANGO2Q6ICL3 276 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 TMC8Q8IU68 726 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 PRSS33Q8NF86 280 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 SHKBP1Q8TBC3 707 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 SHDQ96IW2 340 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 ASB16Q96NS5 453 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 MMS19Q96T76 1030 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 LPIN3Q9BQK8 851 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 LRRC3Q9BY71 257 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 IRF2BPLQ9H1B7 796 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 KCTD10Q9H3F6 313 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 ATXN3LQ9H3M9 355 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 TBC1D17Q9HA65 648 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 DMAC2Q9NW81 257 aa16.43■□□□□ 0.22
NUP50-219ENST00000497960 PIEZO1Q92508 2521 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 GABRDO14764 452 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 ATF6P18850 670 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 NHLH1Q02575 133 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 BIRC3Q13489 604 aa16.42■□□□□ 0.22
NUP50-219ENST00000497960 ARHGAP15Q53QZ3 475 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms