RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 SLC5A4Q9NY91 659 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 CTTNBP2NLQ9P2B4 639 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 NR2E1Q9Y466 385 aa12.26□□□□□ -0.45
SNRNP200-208ENST00000497539 MGAMO43451 1857 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 SMIM23A6NLE4 172 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 MMP3P08254 477 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 SRGAP2CP0DJJ0 459 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 TNFSF9P41273 254 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 MAGEA10P43363 369 aaPredicted RBP12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 DHX9Q08211 1270 aaKnown RBP12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 BIRC3Q13489 604 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 DUOXA2Q1HG44 320 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 SGSM1Q2NKQ1 1148 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 CWF19L1Q69YN2 538 aaKnown RBP12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 CYB5D1Q6P9G0 228 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 MTHFD1LQ6UB35 978 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 CPLX4Q7Z7G2 160 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 FUKQ8N0W3 1084 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 MAGEC3Q8TD91 643 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 TRIM51Q9BSJ1 452 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 CDT1Q9H211 546 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 ALG6Q9Y672 507 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 SMPD1P17405 629 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 PEX5P50542 639 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 PPP2R2AP63151 447 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 ANKRD20A8PQ5CZ79 823 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 MON1BQ7L1V2 547 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 ZNF410Q86VK4 478 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 PARP9Q8IXQ6 854 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 MCOLN2Q8IZK6 566 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 ARFGAP2Q8N6H7 521 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 UBL4BQ8N7F7 174 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 AFG1LQ8WV93 481 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 TRAPPC12Q8WVT3 735 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 ATP8A1Q9Y2Q0 1164 aa12.25□□□□□ -0.45
SNRNP200-208ENST00000497539 CELF2O95319 508 aaKnown RBP12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 LSM8O95777 96 aaKnown RBP12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 KRT5P13647 590 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 ADCYAP1R1P41586 468 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 ACVR2BQ13705 512 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 PCBP1Q15365 356 aaKnown RBP eCLIP12.24□□□□□ -0.453e-6■■□□□ 11.5
SNRNP200-208ENST00000497539 LMBRD2Q68DH5 695 aaPredicted RBP12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 ARL10Q8N8L6 244 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 UHMK1Q8TAS1 419 aaKnown RBP12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 ZNF564Q8TBZ8 553 aaPredicted RBP12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 MIPOL1Q8TD10 442 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 USP6NLQ92738 828 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 ZNF653Q96CK0 615 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 LRRC45Q96CN5 670 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 SPDL1Q96EA4 605 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 NUP85Q9BW27 656 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 IMPG2Q9BZV3 1241 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 NIF3L1Q9GZT8 377 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 VRTNQ9H8Y1 702 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 ZNF408Q9H9D4 720 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 TPX2Q9ULW0 747 aaKnown RBP12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 TLDC2A0PJX2 215 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 STAU1O95793 577 aaKnown RBP12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 CDH5P33151 784 aaPredicted RBP12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 SCTRP47872 440 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 CLCN3P51790 818 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 CDC42EP1Q00587 391 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 PTP4A2Q12974 167 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 ZNF568Q3ZCX4 644 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 LRIG3Q6UXM1 1119 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 ARHGAP22Q7Z5H3 698 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 CACNA2D3Q8IZS8 1091 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 RBBP8NLQ8NC74 664 aaPredicted RBP12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 XYLT2Q9H1B5 865 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 PCDHA3Q9Y5H8 950 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 RRN3P2A6NIE6 340 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 E2F6O75461 281 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 SLC1A1P43005 524 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 YWHAEP62258 255 aaKnown RBP12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 NOMO3P69849 1222 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 C1QBPQ07021 282 aaKnown RBP12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 IFFO1Q0D2I5 559 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 CUL1Q13616 776 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 SNCBQ16143 134 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 MARCH8Q5T0T0 291 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 NT5DC4Q86YG4 428 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 DHRS1Q96LJ7 313 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 IRF2BPLQ9H1B7 796 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 PDZD7Q9H5P4 517 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 ASB7Q9H672 318 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 MINDY3Q9H8M7 445 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 ACP6Q9NPH0 428 aa12.24□□□□□ -0.45
SNRNP200-208ENST00000497539 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 MANSC4A6NHS7 340 aaPredicted RBP12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 A6NJR5 290 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 SHBGP04278 402 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 RPSAP08865 295 aaKnown RBP12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 MAN1A1P33908 653 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 SESN3P58005 492 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 MPP3Q13368 585 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 DGKDQ16760 1214 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 EEF1DP3Q658K8 133 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 OLFML2BQ68BL8 750 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 SPOPLQ6IQ16 392 aa12.23□□□□□ -0.45
SNRNP200-208ENST00000497539 RUFY4Q6ZNE9 571 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms