RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 ZNF804BA4D1E1 1349 aa4.54□□□□□ -1.68
CBX3-208ENST00000497498 TNKSO95271 1327 aa4.54□□□□□ -1.68
CBX3-208ENST00000497498 LRRC14BA6NHZ5 514 aa4.54□□□□□ -1.68
CBX3-208ENST00000497498 ZRANB2O95218 330 aaKnown RBP eCLIP4.54□□□□□ -1.68
CBX3-208ENST00000497498 HNRNPCP07910 306 aaKnown RBP eCLIP4.54□□□□□ -1.689e-6■■■□□ 17.7
CBX3-208ENST00000497498 ITGALP20701 1170 aa4.54□□□□□ -1.68
CBX3-208ENST00000497498 EIF2B5Q13144 721 aaKnown RBP4.54□□□□□ -1.68
CBX3-208ENST00000497498 TBCCQ15814 346 aa4.54□□□□□ -1.68
CBX3-208ENST00000497498 SRSF7Q16629 238 aaKnown RBP eCLIP4.54□□□□□ -1.68
CBX3-208ENST00000497498 ZNF782Q6ZMW2 699 aaPredicted RBP4.54□□□□□ -1.68
CBX3-208ENST00000497498 ZNF551Q7Z340 670 aaPredicted RBP4.54□□□□□ -1.68
CBX3-208ENST00000497498 PNMA8AQ86V59 439 aaPredicted RBP4.54□□□□□ -1.68
CBX3-208ENST00000497498 VGLL2Q8N8G2 317 aa4.54□□□□□ -1.68
CBX3-208ENST00000497498 FAM136AQ96C01 138 aa4.54□□□□□ -1.68
CBX3-208ENST00000497498 MTMR8Q96EF0 704 aa4.54□□□□□ -1.68
CBX3-208ENST00000497498 C1orf43Q9BWL3 253 aa4.54□□□□□ -1.68
CBX3-208ENST00000497498 SEMA4CQ9C0C4 833 aa4.54□□□□□ -1.68
CBX3-208ENST00000497498 WDCPQ9H6R7 721 aa4.54□□□□□ -1.68
CBX3-208ENST00000497498 ZDHHC8Q9ULC8 765 aa4.54□□□□□ -1.68
CBX3-208ENST00000497498 RAD54BQ9Y620 910 aa4.54□□□□□ -1.68
CBX3-208ENST00000497498 SLC16A6O15403 523 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 NXPH3O95157 252 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 KIF20AO95235 890 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 EBLN1P0CF75 366 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 JUPP14923 745 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 CD6P30203 668 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 GRM1Q13255 1194 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 PTPN21Q16825 1174 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 THEMIS2Q5TEJ8 643 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 USP37Q86T82 979 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 PRR18Q8N4B5 295 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 PRPF38AQ8NAV1 312 aaKnown RBP4.53□□□□□ -1.68
CBX3-208ENST00000497498 ATRIPQ8WXE1 791 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 NELL2Q99435 816 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 TINAGL1Q9GZM7 467 aaPredicted RBP4.53□□□□□ -1.68
CBX3-208ENST00000497498 ARHGEF3Q9NR81 526 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 PCDHA3Q9Y5H8 950 aa4.53□□□□□ -1.68
CBX3-208ENST00000497498 ALG1L2C9J202 215 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 VPS4BO75351 444 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 CHRM3P20309 590 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 PHKA1P46020 1223 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 GCLCP48506 637 aaPredicted RBP4.52□□□□□ -1.69
CBX3-208ENST00000497498 HK3P52790 923 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 AMPD3Q01432 767 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 NOGQ13253 232 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 SLC44A4Q53GD3 710 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 TEDDM1Q5T9Z0 273 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 RNF187Q5TA31 235 aaPredicted RBP4.52□□□□□ -1.69
CBX3-208ENST00000497498 VPS53Q5VIR6 699 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 CEP85Q6P2H3 762 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 DTX2Q86UW9 622 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 MIER2Q8N344 545 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 C9orf106Q8NAJ2 232 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 KLHDC4Q8TBB5 520 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 TBC1D5Q92609 795 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 DDX17Q92841 729 aaKnown RBP4.52□□□□□ -1.69
CBX3-208ENST00000497498 REPS1Q96D71 796 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 MRPL46Q9H2W6 279 aaKnown RBP4.52□□□□□ -1.69
CBX3-208ENST00000497498 SLAMF7Q9NQ25 335 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 SERHLQ9NQF3 203 aa4.52□□□□□ -1.69
CBX3-208ENST00000497498 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 PROB1E7EW31 1015 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 ZNF213O14771 459 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 JTBO76095 146 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 FAM163BP0C2L3 166 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 PRR35P0CG20 571 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 PDCP20941 246 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 BOP1Q14137 746 aaKnown RBP4.51□□□□□ -1.69
CBX3-208ENST00000497498 PROSER3Q2NL68 480 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 MTX3Q5HYI7 312 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 ZNF618Q5T7W0 954 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 C11orf87Q6NUJ2 197 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 ANKRD16Q6P6B7 361 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 HEATR3Q7Z4Q2 680 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 SPEF1Q9Y4P9 236 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 SBNO2Q9Y2G9 1366 aa4.51□□□□□ -1.69
CBX3-208ENST00000497498 WASHC2CQ9Y4E1 1318 aa4.5□□□□□ -1.69
CBX3-208ENST00000497498 PPM1DO15297 605 aa4.5□□□□□ -1.69
CBX3-208ENST00000497498 NDUFB7P17568 137 aa4.5□□□□□ -1.69
CBX3-208ENST00000497498 TMEM119Q4V9L6 283 aa4.5□□□□□ -1.69
CBX3-208ENST00000497498 AARS2Q5JTZ9 985 aaKnown RBP4.5□□□□□ -1.69
CBX3-208ENST00000497498 FAM160B1Q5W0V3 765 aa4.5□□□□□ -1.69
CBX3-208ENST00000497498 ZNF626Q68DY1 528 aa4.5□□□□□ -1.69
CBX3-208ENST00000497498 ZNF66Q6ZN08 573 aa4.5□□□□□ -1.69
CBX3-208ENST00000497498 NEK8Q86SG6 692 aa4.5□□□□□ -1.69
CBX3-208ENST00000497498 PPP1R3BQ86XI6 285 aa4.5□□□□□ -1.69
CBX3-208ENST00000497498 TNPO1Q92973 898 aaKnown RBP4.5□□□□□ -1.69
CBX3-208ENST00000497498 RGMAQ96B86 450 aa4.5□□□□□ -1.69
CBX3-208ENST00000497498 FAM167AQ96KS9 214 aa4.5□□□□□ -1.69
CBX3-208ENST00000497498 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.5□□□□□ -1.69
CBX3-208ENST00000497498 ABCF2Q9UG63 623 aa4.5□□□□□ -1.69
CBX3-208ENST00000497498 FEZ2Q9UHY8 353 aaPredicted RBP4.5□□□□□ -1.69
CBX3-208ENST00000497498 BTBD3Q9Y2F9 522 aa4.5□□□□□ -1.69
CBX3-208ENST00000497498 TISP43B9A030 160 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 TP73O15350 636 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 DTNBO60941 627 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 GNAI2P04899 355 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 PDHA1P08559 390 aa4.49□□□□□ -1.69
CBX3-208ENST00000497498 NHLRC4P0CG21 123 aaPredicted RBP4.49□□□□□ -1.69
CBX3-208ENST00000497498 PIM1P11309 404 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms