RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 URI1O94763 535 aaPredicted RBP5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 TTLL1O95922 423 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 CD6P30203 668 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 GCLCP48506 637 aaPredicted RBP5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 SOX10P56693 466 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 TBCCQ15814 346 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 FAM153CQ494X1 144 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 VPS53Q5VIR6 699 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 PPP1R32Q7Z5V6 425 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 CAMKK1Q8N5S9 505 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 PCSK9Q8NBP7 692 aaKnown RBP5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 FKBP10Q96AY3 582 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 FAM136AQ96C01 138 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 MVB12AQ96EY5 273 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 GPATCH3Q96I76 525 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 PBKQ96KB5 322 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 KMT5AQ9NQR1 393 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 IP6K2Q9UHH9 426 aa5.63□□□□□ -1.51
RAB3GAP1-206ENST00000497080 PDHA1P08559 390 aa5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 CDK4P11802 303 aa5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ZFXP17010 805 aaPredicted RBP5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 HDCP19113 662 aa5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 IBSPP21815 317 aaPredicted RBP5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 AKAP5P24588 427 aa5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 EXOSC9Q06265 439 aaKnown RBP5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 SRSF4Q08170 494 aaKnown RBP5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 FOXF2Q12947 444 aa5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 PLS1Q14651 629 aa5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 FAM160B1Q5W0V3 765 aa5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 SRRM1Q8IYB3 904 aaKnown RBP5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 FAM46DQ8NEK8 389 aa5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 DDX17Q92841 729 aaKnown RBP5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 FAM167AQ96KS9 214 aa5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ALG8Q9BVK2 526 aa5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 AASDHPPTQ9NRN7 309 aa5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 EHD3Q9NZN3 535 aa5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 WNT6Q9Y6F9 365 aa5.62□□□□□ -1.51
RAB3GAP1-206ENST00000497080 MANSC4A6NHS7 340 aaPredicted RBP5.61□□□□□ -1.51
RAB3GAP1-206ENST00000497080 PPM1DO15297 605 aa5.61□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ABCG1P45844 678 aa5.61□□□□□ -1.51
RAB3GAP1-206ENST00000497080 NEK2P51955 445 aa5.61□□□□□ -1.51
RAB3GAP1-206ENST00000497080 NKX6-1P78426 367 aaPredicted RBP5.61□□□□□ -1.51
RAB3GAP1-206ENST00000497080 AOX1Q06278 1338 aa5.61□□□□□ -1.51
RAB3GAP1-206ENST00000497080 BMPR2Q13873 1038 aa5.61□□□□□ -1.51
RAB3GAP1-206ENST00000497080 TMEM108Q6UXF1 575 aa5.61□□□□□ -1.51
RAB3GAP1-206ENST00000497080 FAM109AQ8N4B1 249 aa5.61□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.61□□□□□ -1.51
RAB3GAP1-206ENST00000497080 BRINP2Q9C0B6 783 aa5.61□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ANKRD6Q9Y2G4 727 aa5.61□□□□□ -1.51
RAB3GAP1-206ENST00000497080 NOP58Q9Y2X3 529 aaKnown RBP5.61□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ALDH2P05091 517 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 EBLN1P0CF75 366 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 PF4V1P10720 104 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 CCT8P50990 548 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ZNF134P52741 427 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 EIF2B5Q13144 721 aaKnown RBP5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 PLAC9Q5JTB6 97 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 GRAMD1CQ8IYS0 662 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 DDB2Q92466 427 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 DPF1Q92782 380 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 HPS3Q969F9 1004 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 HOOK2Q96ED9 719 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 SLC35A4Q96G79 324 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 SLC46A1Q96NT5 459 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 NELL2Q99435 816 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 TTYH3Q9C0H2 523 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 TCF7L1Q9HCS4 588 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 SERHLQ9NQF3 203 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 SERTAD4Q9NUC0 356 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 PCDHA6Q9UN73 950 aa5.6□□□□□ -1.51
RAB3GAP1-206ENST00000497080 CGB1A6NKQ9 187 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 GCOM1H8Y6P7 765 aaPredicted RBP5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 DNAJB5O75953 348 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 FAM163BP0C2L3 166 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 PIM1P11309 404 aaPredicted RBP5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 JUPP14923 745 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 VCAM1P19320 739 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 HNRNPA0Q13151 305 aaKnown RBP5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 KHDC1LQ5JSQ8 128 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 FCRLBQ6BAA4 426 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 CELF5Q8N6W0 485 aaKnown RBP5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 KLHDC4Q8TBB5 520 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 BRIX1Q8TDN6 353 aaKnown RBP5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 HASPINQ8TF76 798 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 CDK5RAP3Q96JB5 506 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 MAP3K14Q99558 947 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ARMT1Q9H993 441 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ARHGEF3Q9NR81 526 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 PADI4Q9UM07 663 aa5.59□□□□□ -1.51
RAB3GAP1-206ENST00000497080 ANKRD62A6NC57 917 aa5.58□□□□□ -1.52
RAB3GAP1-206ENST00000497080 WIPF3A6NGB9 483 aa5.58□□□□□ -1.52
RAB3GAP1-206ENST00000497080 DCLK1O15075 740 aa5.58□□□□□ -1.52
RAB3GAP1-206ENST00000497080 HNRNPCP07910 306 aaKnown RBP eCLIP5.58□□□□□ -1.52
RAB3GAP1-206ENST00000497080 NDUFB7P17568 137 aa5.58□□□□□ -1.52
RAB3GAP1-206ENST00000497080 DRD4P21917 467 aa5.58□□□□□ -1.52
RAB3GAP1-206ENST00000497080 KCNJ5P48544 419 aa5.58□□□□□ -1.52
RAB3GAP1-206ENST00000497080 ALDH9A1P49189 494 aa5.58□□□□□ -1.52
RAB3GAP1-206ENST00000497080 SP2Q02086 613 aa5.58□□□□□ -1.52
RAB3GAP1-206ENST00000497080 LONRF3Q496Y0 759 aa5.58□□□□□ -1.52
RAB3GAP1-206ENST00000497080 TMEM119Q4V9L6 283 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms