RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 PIK3C3Q8NEB9 887 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 OR14C36Q8NHC7 312 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 GAB3Q8WWW8 586 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 TRIM63Q969Q1 353 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 RAX2Q96IS3 184 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 BARD1Q99728 777 aaKnown RBP4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 CARD11Q9BXL7 1154 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 AP1M1Q9BXS5 423 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 SLC26A6Q9BXS9 759 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 B3GNT5Q9BYG0 378 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 OSBPL6Q9BZF3 934 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 MEGF9Q9H1U4 602 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 ITM2CQ9NQX7 267 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 ANKEF1Q9NU02 776 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 GGA3Q9NZ52 723 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 IFT80Q9P2H3 777 aaPredicted RBP4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 SAE1Q9UBE0 346 aaPredicted RBP4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 DNAI1Q9UI46 699 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 SERPINB13Q9UIV8 391 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 TUBD1Q9UJT1 453 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 VWA7Q9Y334 891 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 HTTP42858 3142 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 LMTK2Q8IWU2 1503 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 PAPPAQ13219 1627 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 USP24Q9UPU5 2620 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 REV3LO60673 3130 aa4.24□□□□□ -1.73
EXOSC3-208ENST00000496910 PLXNC1O60486 1568 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 SYCP2Q9BX26 1530 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 ST20-MTHFSA0A0A6YYL1 179 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 GLTPD2A6NH11 291 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 TISP43B9A030 160 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 B9A039 149 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 H3BML4 177 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 TOR1BO14657 336 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 KPNA5O15131 536 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 B3GALT2O43825 422 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 UBXN7O94888 489 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 LY86O95711 162 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 CYP1A1P04798 512 aaPredicted RBP4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 GAAP10253 952 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 OSMP13725 252 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 TSPAN7P41732 249 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 KCNC1P48547 511 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 CASP5P51878 434 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 CD69Q07108 199 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 PPP3CAQ08209 521 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 ADAM15Q13444 863 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 ADRM1Q16186 407 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 PKN2Q16513 984 aaKnown RBP4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 RNF151Q2KHN1 245 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 PRR16Q569H4 304 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 SLC45A4Q5BKX6 768 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 RNF220Q5VTB9 566 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 DARS2Q6PI48 645 aaKnown RBP4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 DPP9Q86TI2 863 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 ANKRD18AQ8IVF6 992 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 SP8Q8IXZ3 490 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 KBTBD2Q8IY47 623 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 MSL3Q8N5Y2 521 aaKnown RBP4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 LILRA3Q8N6C8 439 aaPredicted RBP4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 LSMEM1Q8N8F7 131 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 MAFAQ8NHW3 353 aaPredicted RBP4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 FEZF2Q8TBJ5 459 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 HOXB13Q92826 284 aaPredicted RBP4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 PAWRQ96IZ0 340 aaKnown RBP4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 RSRC1Q96IZ7 334 aaKnown RBP4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 WDR92Q96MX6 357 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 SEC62Q99442 399 aaKnown RBP4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 MAP3K14Q99558 947 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 SSBP3Q9BWW4 388 aaPredicted RBP4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 EPHX3Q9H6B9 360 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 CERS4Q9HA82 394 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 BARX1Q9HBU1 254 aaPredicted RBP4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 DNAJC28Q9NX36 388 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 RNF181Q9P0P0 153 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 DPP7Q9UHL4 492 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 USP18Q9UMW8 372 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 L1RE1Q9UN81 338 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 GPR45Q9Y5Y3 372 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 KIF15Q9NS87 1388 aa4.23□□□□□ -1.73
EXOSC3-208ENST00000496910 FBN3Q75N90 2809 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 BPTFQ12830 3046 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 NOS1P29475 1434 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 USP6P35125 1406 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 OTOL1A6NHN0 477 aaPredicted RBP4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 EIF3FO00303 357 aaPredicted RBP4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 GOLIM4O00461 696 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 MTA2O94776 668 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 INMTO95050 263 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 EN2P19622 333 aaPredicted RBP4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 EPHB4P54760 987 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 RRADP55042 308 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 ADKP55263 362 aaKnown RBP4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 ROR1Q01973 937 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 BLMHQ13867 455 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 ANO4Q32M45 955 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 SPATA1Q5VX52 437 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 IZUMO3Q5VZ72 239 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 KLHDC10Q6PID8 442 aa4.22□□□□□ -1.73
EXOSC3-208ENST00000496910 NPNTQ6UXI9 565 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms