RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 SNX25Q9H3E2 840 aa20.62■□□□□ 0.89
CTDSP1-213ENST00000496785 CDH22Q9UJ99 828 aa20.62■□□□□ 0.89
CTDSP1-213ENST00000496785 YIPF1Q9Y548 306 aa20.62■□□□□ 0.89
CTDSP1-213ENST00000496785 SEC24AO95486 1093 aa20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 TRIM21P19474 475 aaKnown RBP20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 GCLMP48507 274 aa20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 MXI1P50539 228 aa20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 DCAF17Q5H9S7 520 aaPredicted RBP20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 INTS6LQ5JSJ4 861 aaKnown RBP20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 FRMD5Q7Z6J6 570 aa20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 LEMD2Q8NC56 503 aa20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 ZNF512Q96ME7 567 aaPredicted RBP20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 TMEM209Q96SK2 561 aa20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.61■□□□□ 0.891e-10■□□□□ 9.2
CTDSP1-213ENST00000496785 NXF1Q9UBU9 619 aaKnown RBP20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 RWDD2AQ9UIY3 292 aa20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 CDH9Q9ULB4 789 aa20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 PCDHB5Q9Y5E4 795 aa20.61■□□□□ 0.89
CTDSP1-213ENST00000496785 VNN1O95497 513 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 HLA-DRAP01903 254 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 PTPN2P17706 415 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 EPHB3P54753 998 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 PPP3CAQ08209 521 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 TWF1Q12792 350 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 DUSP4Q13115 394 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 VEPH1Q14D04 833 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 C1orf220Q5T0J3 134 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 SCARA3Q6AZY7 606 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 GRASPQ7Z6J2 395 aaPredicted RBP20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 ZDHHC14Q8IZN3 488 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 KBTBD7Q8WVZ9 684 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 MMRN2Q9H8L6 949 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 ABCB6Q9NP58 842 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 ASB3Q9Y575 518 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 ZFP37Q9Y6Q3 630 aaPredicted RBP20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 DENND4AQ7Z401 1863 aa20.6■□□□□ 0.89
CTDSP1-213ENST00000496785 ZNF197O14709 1029 aa20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 ASS1P00966 412 aaKnown RBP20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 FSHRP23945 695 aa20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 GBP2P32456 591 aaPredicted RBP20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 GNL1P36915 607 aaPredicted RBP20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 PABPC1LQ4VXU2 614 aaKnown RBP20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 C4orf50Q6ZRC1 276 aa20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 ATAD1Q8NBU5 361 aa20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 OR6B3Q8NGW1 331 aa20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 FUBP3Q96I24 572 aaKnown RBP eCLIP20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 FAXDC2Q96IV6 333 aa20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 DUSP9Q99956 384 aaKnown RBP20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 SYT15Q9BQS2 421 aa20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 DNAI2Q9GZS0 605 aa20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 AVENQ9NQS1 362 aaPredicted RBP20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 C2orf16Q68DN1 1984 aa20.59■□□□□ 0.89
CTDSP1-213ENST00000496785 C2CD4DB7Z1M9 353 aa20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 N4BP1O75113 896 aaKnown RBP20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 CCDC192P0DO97 292 aa20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 ALADP13716 330 aa20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 SP100P23497 879 aaPredicted RBP20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 STX17P56962 302 aa20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 MGAT5BQ3V5L5 792 aa20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 CT47A1Q5JQC4 288 aaPredicted RBP20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 CYP4A22Q5TCH4 519 aa20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 ITIH5Q86UX2 942 aa20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 OSTM1Q86WC4 334 aa20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 FBXL13Q8NEE6 735 aa20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 GPT2Q8TD30 523 aa20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 SEPT5Q99719 369 aaPredicted RBP20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 CD320Q9NPF0 282 aa20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 ABI2Q9NYB9 513 aaPredicted RBP20.58■□□□□ 0.89
CTDSP1-213ENST00000496785 SPTBN5Q9NRC6 3674 aaKnown RBP20.58■□□□□ 0.88
CTDSP1-213ENST00000496785 A8MXQ7 604 aa20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 RHOP08100 348 aa20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 ACAT1P24752 427 aaKnown RBP20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 NLRP12P59046 1061 aa20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 NOP14P78316 857 aaKnown RBP20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 CETN1Q12798 172 aa20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 CFAP221Q4G0U5 840 aa20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 WDR44Q5JSH3 913 aa20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 PDZD4Q76G19 769 aaPredicted RBP20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 GET4Q7L5D6 327 aaPredicted RBP20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 LRRTM3Q86VH5 581 aa20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 RNF135Q8IUD6 432 aa20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 SPATA2LQ8IUW3 424 aaPredicted RBP20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 TAS1R2Q8TE23 839 aa20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 ASAH2Q9NR71 780 aa20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 DNMT3BQ9UBC3 853 aaKnown RBP20.57■□□□□ 0.88
CTDSP1-213ENST00000496785 A0A0C4DFX4 3053 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 VNN2O95498 520 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 FGF19O95750 216 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 HAPLN1P10915 354 aaPredicted RBP20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 ERCC5P28715 1186 aaPredicted RBP20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 MARSP56192 900 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 RPL10AP62906 217 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 TPD52L1Q16890 204 aaPredicted RBP20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 SCARA5Q6ZMJ2 495 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 TTC39CQ8N584 583 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 FEZF2Q8TBJ5 459 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 SLC35C1Q96A29 364 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 TNIP3Q96KP6 325 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 CORO1BQ9BR76 489 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 MRPL45Q9BRJ2 306 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms