RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 IP6K2Q9UHH9 426 aa16.15■□□□□ 0.18
COL15A1-204ENST00000496686 GIT1Q9Y2X7 761 aa16.15■□□□□ 0.18
COL15A1-204ENST00000496686 TRIP12Q14669 1992 aaPredicted RBP16.15■□□□□ 0.18
COL15A1-204ENST00000496686 PDCD11Q14690 1871 aaKnown RBP16.14■□□□□ 0.17
COL15A1-204ENST00000496686 KRIT1O00522 736 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 PSTPIP1O43586 416 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 ZNF623O75123 536 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 MICAL2O94851 1124 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 CTSHP09668 335 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 SETSIPP0DME0 302 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 TAF6P49848 677 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 PTPROQ16827 1216 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 GLRA4Q5JXX5 417 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 PPP1R15BQ5SWA1 713 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 FAM43BQ6ZT52 329 aaPredicted RBP16.14■□□□□ 0.17
COL15A1-204ENST00000496686 DPH6Q7L8W6 267 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 TMEM130Q8N3G9 435 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 SLC43A3Q8NBI5 491 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 KRT35Q92764 455 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 PPP1R10Q96QC0 940 aaKnown RBP16.14■□□□□ 0.17
COL15A1-204ENST00000496686 LRRC1Q9BTT6 524 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 CXCL16Q9H2A7 254 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 ZNF446Q9NWS9 450 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 STIM2Q9P246 746 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 HMGXB4Q9UGU5 601 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 NOD1Q9Y239 953 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL15A1-204ENST00000496686 SNX9Q9Y5X1 595 aa16.14■□□□□ 0.17
COL15A1-204ENST00000496686 GOLGA6L10A0A0M3HER8 536 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 FAM170AA1A519 330 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 TMEM191CA6NGB0 347 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 PPEF2O14830 753 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 RRP9O43818 475 aaKnown RBP16.13■□□□□ 0.17
COL15A1-204ENST00000496686 SKIP12755 728 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 GABRB2P47870 512 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 NFX1Q12986 1120 aaKnown RBP16.13■□□□□ 0.17
COL15A1-204ENST00000496686 PAK2Q13177 524 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 DSC3Q14574 896 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 ZNF268Q14587 947 aaPredicted RBP16.13■□□□□ 0.17
COL15A1-204ENST00000496686 LONRF2Q1L5Z9 754 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 ARHGAP17Q68EM7 881 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 LHX8Q68G74 356 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 TOP6BLQ8N6T0 577 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 EIF1ADQ8N9N8 165 aaKnown RBP16.13■□□□□ 0.17
COL15A1-204ENST00000496686 ARRDC4Q8NCT1 418 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 BTBD6Q96KE9 485 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 HEXIM2Q96MH2 286 aaKnown RBP16.13■□□□□ 0.17
COL15A1-204ENST00000496686 KRT12Q99456 494 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.13■□□□□ 0.17
COL15A1-204ENST00000496686 KLK14Q9P0G3 267 aa16.13■□□□□ 0.17
COL15A1-204ENST00000496686 KPNA7A9QM74 516 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 M0QYV0 167 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 PTGESO14684 152 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 FGGP02679 453 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
COL15A1-204ENST00000496686 PAX3P23760 479 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 GRK4P32298 578 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 SSTR3P32745 418 aaPredicted RBP16.12■□□□□ 0.17
COL15A1-204ENST00000496686 PIGHQ14442 188 aaPredicted RBP16.12■□□□□ 0.17
COL15A1-204ENST00000496686 PTPN20Q4JDL3 420 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 BEND6Q5SZJ8 279 aaPredicted RBP16.12■□□□□ 0.17
COL15A1-204ENST00000496686 LRRC38Q5VT99 294 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 CCNI2Q6ZMN8 369 aaPredicted RBP16.12■□□□□ 0.17
COL15A1-204ENST00000496686 RHOT1Q8IXI2 618 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 IFT20Q8IY31 132 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 NIPA2Q8N8Q9 360 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 CCDC26Q8TAB7 109 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 IPO4Q8TEX9 1081 aaKnown RBP16.12■□□□□ 0.17
COL15A1-204ENST00000496686 FNIP1Q8TF40 1166 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 MAIP1Q8WWC4 291 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 C18orf8Q96DM3 657 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 RUNDC3BQ96NL0 473 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 MRPL45Q9BRJ2 306 aaKnown RBP16.12■□□□□ 0.17
COL15A1-204ENST00000496686 AGO3Q9H9G7 860 aaKnown RBP16.12■□□□□ 0.17
COL15A1-204ENST00000496686 UBN1Q9NPG3 1134 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
COL15A1-204ENST00000496686 PADI3Q9ULW8 664 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 PHF24Q9UPV7 400 aa16.12■□□□□ 0.17
COL15A1-204ENST00000496686 A0A0U1RQG5 324 aaPredicted RBP16.11■□□□□ 0.17
COL15A1-204ENST00000496686 SIGLEC16A6NMB1 481 aa16.11■□□□□ 0.17
COL15A1-204ENST00000496686 WARSP23381 471 aaKnown RBP16.11■□□□□ 0.17
COL15A1-204ENST00000496686 GPD2P43304 727 aa16.11■□□□□ 0.17
COL15A1-204ENST00000496686 MARCKSL1P49006 195 aa16.11■□□□□ 0.17
COL15A1-204ENST00000496686 SNX16P57768 344 aa16.11■□□□□ 0.17
COL15A1-204ENST00000496686 RNASE9P60153 205 aaKnown RBP16.11■□□□□ 0.17
COL15A1-204ENST00000496686 SOX4Q06945 474 aaPredicted RBP16.11■□□□□ 0.17
COL15A1-204ENST00000496686 PDCLQ13371 301 aa16.11■□□□□ 0.17
COL15A1-204ENST00000496686 LPIN1Q14693 890 aa16.11■□□□□ 0.17
COL15A1-204ENST00000496686 SOWAHAQ2M3V2 549 aa16.11■□□□□ 0.17
COL15A1-204ENST00000496686 DCUN1D2Q6PH85 259 aa16.11■□□□□ 0.17
COL15A1-204ENST00000496686 CRYBG2Q8N1P7 616 aa16.11■□□□□ 0.17
COL15A1-204ENST00000496686 ZNF784Q8NCA9 323 aaPredicted RBP16.11■□□□□ 0.17
COL15A1-204ENST00000496686 ZNF296Q8WUU4 475 aaPredicted RBP16.11■□□□□ 0.17
COL15A1-204ENST00000496686 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL15A1-204ENST00000496686 PGBD4Q96DM1 585 aa16.11■□□□□ 0.17
COL15A1-204ENST00000496686 GDF3Q9NR23 364 aa16.11■□□□□ 0.17
COL15A1-204ENST00000496686 A0A1W2PQ45 241 aaPredicted RBP16.1■□□□□ 0.17
COL15A1-204ENST00000496686 A0A1W2PQY0 241 aa16.1■□□□□ 0.17
COL15A1-204ENST00000496686 BHMG1C9JSJ3 638 aaPredicted RBP16.1■□□□□ 0.17
COL15A1-204ENST00000496686 HUS1O60921 280 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms