RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 ATP8B3O60423 1300 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 GABRDO14764 452 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 CYP26A1O43174 497 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 ARHGAP6O43182 974 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 THAP12O43422 761 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 SOD2P04179 222 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 ITGB1P05556 798 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 URODP06132 367 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 PNMA6AP0CW24 399 aaPredicted RBP10.62□□□□□ -0.71
C4A-258ENST00000496659 VDRP11473 427 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 CYP11B1P15538 503 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 FECHP22830 423 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 CTNNB1P35222 781 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 ZNF132P52740 706 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 NDST1P52848 882 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 CDH8P55286 799 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 USP41Q3LFD5 358 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 ZNF394Q53GI3 561 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 HS1BP3Q53T59 392 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 SGO2Q562F6 1265 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 FAM171A1Q5VUB5 890 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 TRIM72Q6ZMU5 477 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 ANKS3Q6ZW76 656 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 CEP57Q86XR8 500 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 CCDC170Q8IYT3 715 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 TXLNBQ8N3L3 684 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 KBTBD7Q8WVZ9 684 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 ACBD6Q9BR61 282 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 TTPALQ9BTX7 342 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 HERC2P3Q9BVR0 1158 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 ZNF576Q9H609 170 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 HCSTQ9UBK5 93 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 CDH23Q9H251 3354 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 PRUNE2Q8WUY3 3088 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 PTPRSQ13332 1948 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 TTC28Q96AY4 2481 aa10.62□□□□□ -0.71
C4A-258ENST00000496659 TSC2P49815 1807 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 LINC01553A4QN01 128 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 OR6C75A6NL08 312 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 NT5C1B-RDH14C9J2C7 533 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 I3L4J1 428 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 RNF225M0QZC1 329 aaPredicted RBP10.61□□□□□ -0.71
C4A-258ENST00000496659 AKR1B10O60218 316 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 RB1P06400 928 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 FGFR3P22607 806 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 TKTP29401 623 aaKnown RBP10.61□□□□□ -0.71
C4A-258ENST00000496659 BMPR1AP36894 532 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 PBX3P40426 434 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 GLUD2P49448 558 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 RABGGTBP53611 331 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 RAD23BP54727 409 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 SLC8A3P57103 927 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 CDR2Q01850 454 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 PLCB3Q01970 1234 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 UBE3AQ05086 875 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 GOLGA8FQ08AF8 430 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 GOLGA8DPQ0D2H9 430 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
C4A-258ENST00000496659 SCARA3Q6AZY7 606 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 CD300LGQ6UXG3 332 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 DDX53Q86TM3 631 aaKnown RBP10.61□□□□□ -0.71
C4A-258ENST00000496659 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.61□□□□□ -0.71
C4A-258ENST00000496659 GPR65Q8IYL9 337 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 DCP1BQ8IZD4 617 aaKnown RBP10.61□□□□□ -0.71
C4A-258ENST00000496659 B3GALNT2Q8NCR0 500 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 MSANTD4Q8NCY6 345 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 MAFAQ8NHW3 353 aaPredicted RBP10.61□□□□□ -0.71
C4A-258ENST00000496659 EPS8L1Q8TE68 723 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 TIFAQ96CG3 184 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 HEXIM2Q96MH2 286 aaKnown RBP10.61□□□□□ -0.71
C4A-258ENST00000496659 TGS1Q96RS0 853 aaKnown RBP10.61□□□□□ -0.71
C4A-258ENST00000496659 SYT15Q9BQS2 421 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 C11orf84Q9BUA3 381 aaPredicted RBP10.61□□□□□ -0.71
C4A-258ENST00000496659 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.61□□□□□ -0.71
C4A-258ENST00000496659 HAUS4Q9H6D7 363 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 NHEJ1Q9H9Q4 299 aaPredicted RBP10.61□□□□□ -0.71
C4A-258ENST00000496659 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.61□□□□□ -0.71
C4A-258ENST00000496659 SEPT11Q9NVA2 429 aaKnown RBP10.61□□□□□ -0.71
C4A-258ENST00000496659 HESX1Q9UBX0 185 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 LZTS1Q9Y250 596 aa10.61□□□□□ -0.71
C4A-258ENST00000496659 YBX2Q9Y2T7 364 aaKnown RBP10.61□□□□□ -0.71
C4A-258ENST00000496659 F8W810 466 aa10.6□□□□□ -0.71
C4A-258ENST00000496659 LPXNO60711 386 aa10.6□□□□□ -0.71
C4A-258ENST00000496659 FGF18O76093 207 aa10.6□□□□□ -0.71
C4A-258ENST00000496659 OAZ2O95190 189 aa10.6□□□□□ -0.71
C4A-258ENST00000496659 LSM8O95777 96 aaKnown RBP10.6□□□□□ -0.71
C4A-258ENST00000496659 CA3P07451 260 aa10.6□□□□□ -0.71
C4A-258ENST00000496659 SKILP12757 684 aa10.6□□□□□ -0.71
C4A-258ENST00000496659 MYOGP15173 224 aa10.6□□□□□ -0.71
C4A-258ENST00000496659 FOSL2P15408 326 aa10.6□□□□□ -0.71
C4A-258ENST00000496659 TNFAIP3P21580 790 aa10.6□□□□□ -0.71
C4A-258ENST00000496659 CLCN1P35523 988 aa10.6□□□□□ -0.71
C4A-258ENST00000496659 DEKP35659 375 aaKnown RBP10.6□□□□□ -0.71
C4A-258ENST00000496659 SMARCB1Q12824 385 aa10.6□□□□□ -0.71
C4A-258ENST00000496659 SPA17Q15506 151 aa10.6□□□□□ -0.71
C4A-258ENST00000496659 NFE2Q16621 373 aaPredicted RBP10.6□□□□□ -0.71
C4A-258ENST00000496659 CTXN3Q4LDR2 81 aa10.6□□□□□ -0.71
C4A-258ENST00000496659 INTS6LQ5JSJ4 861 aaKnown RBP10.6□□□□□ -0.71
C4A-258ENST00000496659 E4F1Q66K89 784 aaPredicted RBP10.6□□□□□ -0.71
C4A-258ENST00000496659 HGSNATQ68CP4 663 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms