RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 ADAM12O43184 909 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 TGM5O43548 720 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 C1RP00736 705 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 PDGFRBP09619 1106 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 WEE2P0C1S8 567 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 FAM163BP0C2L3 166 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 OR4Q2P0C623 313 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 SPATA31D3P0C874 917 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 ZNF18P17022 549 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 ACAT1P24752 427 aaKnown RBP10.33□□□□□ -0.76
PRPF3-207ENST00000496202 ASPAP45381 313 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 COPB1P53618 953 aaKnown RBP10.33□□□□□ -0.76
PRPF3-207ENST00000496202 SMARCB1Q12824 385 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 ADAM15Q13444 863 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 IQCB1Q15051 598 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 MAPRE1Q15691 268 aaKnown RBP10.33□□□□□ -0.76
PRPF3-207ENST00000496202 FILIP1LQ4L180 1135 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 SLC39A12Q504Y0 691 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 SMYD5Q6GMV2 418 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 RSPO2Q6UXX9 243 aaPredicted RBP10.33□□□□□ -0.76
PRPF3-207ENST00000496202 SPATA31D4Q6ZUB0 917 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 CCDC149Q6ZUS6 474 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 LUZP1Q86V48 1076 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 OSTM1Q86WC4 334 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 PPM1KQ8N3J5 372 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 TTC39CQ8N584 583 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 KREMEN2Q8NCW0 462 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 OR10T2Q8NGX3 314 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 SLC22A17Q8WUG5 538 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 KBTBD7Q8WVZ9 684 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 HLA-CQ95604 372 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 FAXDC2Q96IV6 333 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 TNIP3Q96KP6 325 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 SYT15Q9BQS2 421 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 ACBD6Q9BR61 282 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 MRPL45Q9BRJ2 306 aaKnown RBP10.33□□□□□ -0.76
PRPF3-207ENST00000496202 ANP32EQ9BTT0 268 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 BCO2Q9BYV7 579 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 ZCWPW1Q9H0M4 648 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 PLEKHA4Q9H4M7 779 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 UBE2ZQ9H832 354 aaPredicted RBP10.33□□□□□ -0.76
PRPF3-207ENST00000496202 APOBEC3GQ9HC16 384 aaKnown RBP10.33□□□□□ -0.76
PRPF3-207ENST00000496202 LIMA1Q9UHB6 759 aaKnown RBP10.33□□□□□ -0.76
PRPF3-207ENST00000496202 AFF4Q9UHB7 1163 aaKnown RBP10.33□□□□□ -0.76
PRPF3-207ENST00000496202 FBXW11Q9UKB1 542 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 CDH9Q9ULB4 789 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 BARX2Q9UMQ3 279 aaPredicted RBP10.33□□□□□ -0.76
PRPF3-207ENST00000496202 ATP8B3O60423 1300 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 WDR27A2RRH5 827 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 LGALS16A8MUM7 142 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 GABRDO14764 452 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 TBC1D4O60343 1298 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 LRRN2O75325 713 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 GLP2RO95838 553 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 SERPINC1P01008 464 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 ATP1A3P13637 1013 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 HOXB8P17481 243 aaPredicted RBP10.32□□□□□ -0.76
PRPF3-207ENST00000496202 CD58P19256 250 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 KCNA5P22460 613 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 CDH8P55286 799 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 ZNF445P59923 1031 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 PSMC1P62191 440 aaKnown RBP10.32□□□□□ -0.76
PRPF3-207ENST00000496202 RBM10P98175 930 aaKnown RBP10.32□□□□□ -0.76
PRPF3-207ENST00000496202 PDAP1Q13442 181 aaKnown RBP10.32□□□□□ -0.76
PRPF3-207ENST00000496202 CUL2Q13617 745 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 NFE2Q16621 373 aaPredicted RBP10.32□□□□□ -0.76
PRPF3-207ENST00000496202 INTS6LQ5JSJ4 861 aaKnown RBP10.32□□□□□ -0.76
PRPF3-207ENST00000496202 MIIPQ5JXC2 388 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 PPM1LQ5SGD2 360 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 LIMS2Q7Z4I7 341 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 EHBP1Q8NDI1 1231 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 VN1R2Q8NFZ6 395 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 ZNF461Q8TAF7 563 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 HDAC7Q8WUI4 952 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 TATDN2Q93075 761 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 FAM81BQ96LP2 452 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 PCMTD1Q96MG8 357 aaPredicted RBP10.32□□□□□ -0.76
PRPF3-207ENST00000496202 PGLYRP2Q96PD5 576 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 TMEM209Q96SK2 561 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 RTP3Q9BQQ7 232 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 SDCBP2Q9H190 292 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 FAM124BQ9H5Z6 455 aaPredicted RBP10.32□□□□□ -0.76
PRPF3-207ENST00000496202 SFXN1Q9H9B4 322 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 CYP4F11Q9HBI6 524 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 ABI2Q9NYB9 513 aaPredicted RBP10.32□□□□□ -0.76
PRPF3-207ENST00000496202 MAFFQ9ULX9 164 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 COG5Q9UP83 839 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 PCDHB5Q9Y5E4 795 aa10.32□□□□□ -0.76
PRPF3-207ENST00000496202 HCRTO43612 131 aa10.31□□□□□ -0.76
PRPF3-207ENST00000496202 TBX10O75333 385 aa10.31□□□□□ -0.76
PRPF3-207ENST00000496202 ABLIM3O94929 683 aa10.31□□□□□ -0.76
PRPF3-207ENST00000496202 LRG1P02750 347 aa10.31□□□□□ -0.76
PRPF3-207ENST00000496202 C8AP07357 584 aa10.31□□□□□ -0.76
PRPF3-207ENST00000496202 ATF2P15336 505 aa10.31□□□□□ -0.76
PRPF3-207ENST00000496202 LMO2P25791 158 aa10.31□□□□□ -0.76
PRPF3-207ENST00000496202 NDST1P52848 882 aa10.31□□□□□ -0.76
PRPF3-207ENST00000496202 MFAP3P55082 362 aa10.31□□□□□ -0.76
PRPF3-207ENST00000496202 UBXN1Q04323 297 aa10.31□□□□□ -0.76
PRPF3-207ENST00000496202 ADCY1Q08828 1119 aa10.31□□□□□ -0.76
PRPF3-207ENST00000496202 INCA1Q0VD86 236 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms