RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	GOLGA8A	A7E2F4	631 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	GOLGA8B	A8MQT2	603 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	LOC400499	M0QZD8	3231 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	MAN2B1	O00754	1011 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	GSTA4	O15217	222 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	NKRF	O15226	690 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	PMM2	O15305	246 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	PPP1R11	O60927	126 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	TBX10	O75333	385 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	PRDM1	O75626	825 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	LSP1	P33241	339 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	NOV	P48745	357 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	WDR5	P61964	334 aa	Known RBP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	IRF9	Q00978	393 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	CNTN2	Q02246	1040 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	ITGA7	Q13683	1181 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	ACVR2B	Q13705	512 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	SAFB	Q15424	915 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	CRY1	Q16526	586 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	IFI16	Q16666	785 aa	Known RBP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	NKPD1	Q17RQ9	610 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	INO80D	Q53TQ3	878 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	OGFOD3	Q6PK18	319 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	TOGARAM2	Q6ZUX3	1019 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	RPAIN	Q86UA6	219 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	PTRH1	Q86Y79	214 aa	Known RBP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	FBXO16	Q8IX29	292 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	AMOTL1	Q8IY63	956 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	DCLK2	Q8N568	766 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	NEDD1	Q8NHV4	660 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	DLG3	Q92796	817 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	NKD2	Q969F2	451 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	UTP4	Q969X6	686 aa	Known RBP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	TGS1	Q96RS0	853 aa	Known RBP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	PRRX2	Q99811	253 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	NAA15	Q9BXJ9	866 aa	Known RBP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	UPF3B	Q9BZI7	483 aa	Known RBP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	LRRCC1	Q9C099	1032 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	SMOC2	Q9H3U7	446 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	RAVER2	Q9HCJ3	691 aa	Known RBP	4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	ECHDC1	Q9NTX5	307 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	RNF146	Q9NTX7	359 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	MTMR4	Q9NYA4	1195 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	RCAN3	Q9UKA8	241 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	TCFL5	Q9UL49	500 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	FAM184B	Q9ULE4	1060 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	PHTF1	Q9UMS5	762 aa		4.93	□□□□□ -1.62
VPS52-222	ENST00000495981	MICAL3	Q7RTP6	2002 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	GCN1	Q92616	2671 aa	Known RBP	4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	TRBV23OR9-2	A0A075B6M9	112 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	LOC730098	B7Z3J9	87 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	AP1G1	O43747	822 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	KDM1A	O60341	852 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	TTLL1	O95922	423 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	FOS	P01100	380 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	IQCF3	P0C7M6	154 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	COL6A2	P12110	1019 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	RHCE	P18577	417 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	KRT15	P19012	456 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	C5AR1	P21730	350 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	TDO2	P48775	406 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	MTNR1B	P49286	362 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	STAT2	P52630	851 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	RHD	Q02161	417 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	HYAL1	Q12794	435 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	MBTPS1	Q14703	1052 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	NFKBIB	Q15653	356 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	GPR19	Q15760	415 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	PKN1	Q16512	942 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	GRAMD1B	Q3KR37	738 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	HSF5	Q4G112	596 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	MUM1L1	Q5H9M0	696 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	ATAT1	Q5SQI0	421 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	SLC30A10	Q6XR72	485 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	ARHGAP36	Q6ZRI8	547 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	CPXCR1	Q8N123	301 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	STK11IP	Q8N1F8	1099 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	CHST13	Q8NET6	341 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	TET1	Q8NFU7	2136 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	GJA10	Q969M2	543 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	MRPL38	Q96DV4	380 aa	Known RBP	4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	CTAGE1	Q96RT6	745 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	ELAC2	Q9BQ52	826 aa	Known RBP	4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	GTPBP4	Q9BZE4	634 aa	Known RBP	4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	ABHD16B	Q9H3Z7	469 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	ACAD9	Q9H845	621 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	MAN1C1	Q9NR34	630 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	TOMM22	Q9NS69	142 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	C1orf112	Q9NSG2	853 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	KLHL11	Q9NVR0	708 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	ERVK13-1	Q9NX77	482 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	CLDND1	Q9NY35	253 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	CYP39A1	Q9NYL5	469 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	FBXO40	Q9UH90	709 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	TUBD1	Q9UJT1	453 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	FEM1B	Q9UK73	627 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	INVS	Q9Y283	1065 aa		4.92	□□□□□ -1.62
VPS52-222	ENST00000495981	B3GALT1	Q9Y5Z6	326 aa		4.92	□□□□□ -1.62

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