RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 NFATC3Q12968 1075 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 SEPT2Q15019 361 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 SHHQ15465 462 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 GPR158Q5T848 1215 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 ANO1Q5XXA6 986 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 UNQ6494/PRO21346Q6UXR6 183 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 SLC39A5Q6ZMH5 540 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 Q6ZUG5 572 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 CXXC5Q7LFL8 322 aaKnown RBP7.63□□□□□ -1.19
VIM-207ENST00000495528 SIAH1Q8IUQ4 282 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 MOV10L1Q9BXT6 1211 aaKnown RBP7.63□□□□□ -1.19
VIM-207ENST00000495528 ANO3Q9BYT9 981 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 ZDHHC5Q9C0B5 715 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 BARX1Q9HBU1 254 aaPredicted RBP7.63□□□□□ -1.19
VIM-207ENST00000495528 LUC7LQ9NQ29 371 aaKnown RBP7.63□□□□□ -1.19
VIM-207ENST00000495528 TOPORSQ9NS56 1045 aaPredicted RBP7.63□□□□□ -1.19
VIM-207ENST00000495528 ATP11BQ9Y2G3 1177 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 NOP58Q9Y2X3 529 aaKnown RBP7.63□□□□□ -1.19
VIM-207ENST00000495528 ATAD5Q96QE3 1844 aa7.63□□□□□ -1.19
VIM-207ENST00000495528 MROH6A6NGR9 719 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 NOBOXO60393 691 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 CLEC2LP0C7M8 214 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 CDK11BP21127 795 aaKnown RBP7.62□□□□□ -1.19
VIM-207ENST00000495528 ADORA2AP29274 412 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 RRADP55042 308 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 GABPAQ06546 454 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 COG2Q14746 738 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 KIAA1755Q5JYT7 1200 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 PRAMEF19Q5SWL8 479 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 C9orf50Q5SZB4 431 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 GRAMD4Q6IC98 578 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 FRMD7Q6ZUT3 714 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 ESPNLQ6ZVH7 1005 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 DPP9Q86TI2 863 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 RASSF3Q86WH2 238 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 SPATS2Q86XZ4 545 aaKnown RBP7.62□□□□□ -1.19
VIM-207ENST00000495528 BADQ92934 168 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 FERMT2Q96AC1 680 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 CDX2Q99626 313 aaPredicted RBP7.62□□□□□ -1.19
VIM-207ENST00000495528 RIOK1Q9BRS2 568 aaKnown RBP7.62□□□□□ -1.19
VIM-207ENST00000495528 CHMP4BQ9H444 224 aaKnown RBP7.62□□□□□ -1.19
VIM-207ENST00000495528 ZBTB40Q9NUA8 1239 aa7.62□□□□□ -1.19
VIM-207ENST00000495528 A0A0G2JNJ9 132 aa7.61□□□□□ -1.19
VIM-207ENST00000495528 TRIM43BA6NCK2 446 aa7.61□□□□□ -1.19
VIM-207ENST00000495528 MPHOSPH10O00566 681 aaKnown RBP7.61□□□□□ -1.19
VIM-207ENST00000495528 STRNO43815 780 aa7.61□□□□□ -1.19
VIM-207ENST00000495528 IBSPP21815 317 aaPredicted RBP7.61□□□□□ -1.19
VIM-207ENST00000495528 STAT5BP51692 787 aa7.61□□□□□ -1.19
VIM-207ENST00000495528 SESN3P58005 492 aa7.61□□□□□ -1.19
VIM-207ENST00000495528 MAP3K12Q12852 859 aa7.61□□□□□ -1.19
VIM-207ENST00000495528 TOP3AQ13472 1001 aaPredicted RBP7.61□□□□□ -1.19
VIM-207ENST00000495528 TRIM60Q495X7 471 aa7.61□□□□□ -1.19
VIM-207ENST00000495528 RNF219Q5W0B1 726 aaPredicted RBP7.61□□□□□ -1.19
VIM-207ENST00000495528 CERS3Q8IU89 383 aa7.61□□□□□ -1.19
VIM-207ENST00000495528 PRPF38AQ8NAV1 312 aaKnown RBP7.61□□□□□ -1.19
VIM-207ENST00000495528 TRIM43Q96BQ3 446 aaPredicted RBP7.61□□□□□ -1.19
VIM-207ENST00000495528 KCNC2Q96PR1 638 aa7.61□□□□□ -1.19
VIM-207ENST00000495528 SPATC1LQ9H0A9 340 aa7.61□□□□□ -1.19
VIM-207ENST00000495528 HOXC10Q9NYD6 342 aa7.61□□□□□ -1.19
VIM-207ENST00000495528 Q9UFV3 132 aa7.61□□□□□ -1.19
VIM-207ENST00000495528 CUL9Q8IWT3 2517 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 OTOL1A6NHN0 477 aaPredicted RBP7.6□□□□□ -1.19
VIM-207ENST00000495528 KBTBD13C9JR72 458 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 SEPT4O43236 478 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 PRKD3O94806 890 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 ZNF888P0CJ79 500 aaPredicted RBP7.6□□□□□ -1.19
VIM-207ENST00000495528 CYP2D6P10635 497 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 ITGB8P26012 769 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 PDCD1Q15116 288 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 LRRC41Q15345 812 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 ZBTB41Q5SVQ8 909 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 ERICH6BQ5W0A0 696 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 KIAA1841Q6NSI8 718 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 FAM124AQ86V42 546 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 CXorf67Q86X51 503 aaPredicted RBP7.6□□□□□ -1.19
VIM-207ENST00000495528 CMIPQ8IY22 773 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 KLHL36Q8N4N3 616 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 SLC44A5Q8NCS7 719 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 SHCBP1Q8NEM2 672 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 TTYH1Q9H313 450 aaPredicted RBP7.6□□□□□ -1.19
VIM-207ENST00000495528 MTG2Q9H4K7 406 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 MCM9Q9NXL9 1143 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 SLC5A4Q9NY91 659 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 USP36Q9P275 1121 aaKnown RBP7.6□□□□□ -1.19
VIM-207ENST00000495528 FBXO10Q9UK96 956 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 EXOC6BQ9Y2D4 811 aa7.6□□□□□ -1.19
VIM-207ENST00000495528 PRSS38A1L453 326 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 C9orf118A6NHY6 69 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 PCDH8O95206 1070 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 CSF2RBP32927 897 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 SCAND1P57086 179 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 ANTXR2P58335 489 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 PLS1Q14651 629 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 KRTAP19-4Q3LI73 84 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 FAM47AQ5JRC9 791 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 SLC9C2Q5TAH2 1124 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 CEP85Q6P2H3 762 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 TMED8Q6PL24 325 aaPredicted RBP7.59□□□□□ -1.19
VIM-207ENST00000495528 AACSQ86V21 672 aa7.59□□□□□ -1.19
VIM-207ENST00000495528 KBTBD2Q8IY47 623 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms