RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 ATICP31939 592 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 ZNF132P52740 706 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 WNT7BP56706 349 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 IGBP1P78318 339 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 CENPCQ03188 943 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 LONRF2Q1L5Z9 754 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 HDXQ7Z353 690 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 PALB2Q86YC2 1186 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 KRT222Q8N1A0 295 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 OR5B17Q8NGF7 314 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 TSPAN18Q96SJ8 248 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 ADPGKQ9BRR6 497 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 PI4K2AQ9BTU6 479 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 ACBD3Q9H3P7 528 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 VRTNQ9H8Y1 702 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 TAS2R14Q9NYV8 317 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 A0A087WZ62 844 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 TTLL13PA6NNM8 815 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 TMCO5BA8MYB1 307 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 STAU1O95793 577 aaKnown RBP17.31■□□□□ 0.36
CBX4-204ENST00000495122 UNGP13051 313 aaPredicted RBP17.31■□□□□ 0.36
CBX4-204ENST00000495122 TNFSF9P41273 254 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 VSNL1P62760 191 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 BEND6Q5SZJ8 279 aaPredicted RBP17.31■□□□□ 0.36
CBX4-204ENST00000495122 LIN9Q5TKA1 542 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 LMBRD2Q68DH5 695 aaPredicted RBP17.31■□□□□ 0.36
CBX4-204ENST00000495122 C8orf74Q6P047 294 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 TOP1MTQ969P6 601 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 ZNF653Q96CK0 615 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 ARHGEF26Q96DR7 871 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 FDXACB1Q9BRP7 624 aaPredicted RBP17.31■□□□□ 0.36
CBX4-204ENST00000495122 ZNF518BQ9C0D4 1074 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 PDZD7Q9H5P4 517 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 APOBEC3GQ9HC16 384 aaKnown RBP17.31■□□□□ 0.36
CBX4-204ENST00000495122 LMCD1Q9NZU5 365 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 MTUS1Q9ULD2 1270 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 DERAQ9Y315 318 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 PCDHB4Q9Y5E5 795 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 ANK1P16157 1881 aa17.31■□□□□ 0.36
CBX4-204ENST00000495122 ERLIN2O94905 339 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 GHRP10912 638 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 P4HA1P13674 534 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 CTNNA2P26232 953 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 AXLP30530 894 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 GNA15P30679 374 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 CXCR5P32302 372 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 NSFP46459 744 aaKnown RBP17.3■□□□□ 0.36
CBX4-204ENST00000495122 C2orf54Q08AI8 447 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 GPS2Q13227 327 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 LPIN1Q14693 890 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 TAF3Q5VWG9 929 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 EEF1DP3Q658K8 133 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 RSPH3Q86UC2 560 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 KIAA0319LQ8IZA0 1049 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 RBBP8NLQ8NC74 664 aaPredicted RBP17.3■□□□□ 0.36
CBX4-204ENST00000495122 DNAJB3Q8WWF6 145 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 NLRP7Q8WX94 980 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 GCOM2Q9BZD3 368 aaPredicted RBP17.3■□□□□ 0.36
CBX4-204ENST00000495122 MTMR12Q9C0I1 747 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 SLITRK6Q9H5Y7 841 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 MINDY3Q9H8M7 445 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 VIPAS39Q9H9C1 493 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 PLEKHA5Q9HAU0 1116 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 OSGEPQ9NPF4 335 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 STIM2Q9P246 746 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 C2CD2Q9Y426 696 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 NUB1Q9Y5A7 615 aa17.3■□□□□ 0.36
CBX4-204ENST00000495122 A0A1B0GUA9 196 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 CCDC66A2RUB6 948 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 MAP2K7O14733 419 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 RPLP2P05387 115 aaKnown RBP17.29■□□□□ 0.36
CBX4-204ENST00000495122 STAG3L1P0CL83 205 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 GRM5P41594 1212 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 SLC1A1P43005 524 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 TFF2Q03403 129 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
CBX4-204ENST00000495122 SKIV2LQ15477 1246 aaKnown RBP17.29■□□□□ 0.36
CBX4-204ENST00000495122 ZNF699Q32M78 642 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 PHF13Q86YI8 300 aaPredicted RBP17.29■□□□□ 0.36
CBX4-204ENST00000495122 THNSL1Q8IYQ7 743 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 MCOLN2Q8IZK6 566 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 ZNF564Q8TBZ8 553 aaPredicted RBP17.29■□□□□ 0.36
CBX4-204ENST00000495122 ADAMTS19Q8TE59 1207 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 ZBTB10Q96DT7 871 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 C17orf80Q9BSJ5 609 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 PLVAPQ9BX97 442 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 FUT8Q9BYC5 575 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 EPC1Q9H2F5 836 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 CYP3A43Q9HB55 503 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 MRPL47Q9HD33 250 aaKnown RBP17.29■□□□□ 0.36
CBX4-204ENST00000495122 L1RE1Q9UN81 338 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 COG5Q9UP83 839 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 CDY2AQ9Y6F7 541 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 SCINQ9Y6U3 715 aa17.29■□□□□ 0.36
CBX4-204ENST00000495122 TNFRSF10AO00220 468 aa17.28■□□□□ 0.36
CBX4-204ENST00000495122 DDX3YO15523 660 aaKnown RBP17.28■□□□□ 0.36
CBX4-204ENST00000495122 B4GALT5O43286 388 aa17.28■□□□□ 0.36
CBX4-204ENST00000495122 CEP104O60308 925 aa17.28■□□□□ 0.36
CBX4-204ENST00000495122 TSPAN1O60635 241 aa17.28■□□□□ 0.36
CBX4-204ENST00000495122 MRPS6P82932 125 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms