RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 NLRP12P59046 1061 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 DUSP4Q13115 394 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 TRPC3Q13507 836 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 STX1AQ16623 288 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 WDR72Q3MJ13 1102 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 SLC39A12Q504Y0 691 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 RTL10Q7L3V2 364 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 DPH6Q7L8W6 267 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 GRASPQ7Z6J2 395 aaPredicted RBP18.36■□□□□ 0.53
SNX17-209ENST00000494893 THEM5Q8N1Q8 247 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 SPATA18Q8TC71 538 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 TAS1R2Q8TE23 839 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 SDCBP2Q9H190 292 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 ANO10Q9NW15 660 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 DNMT3BQ9UBC3 853 aaKnown RBP18.36■□□□□ 0.53
SNX17-209ENST00000494893 MAFFQ9ULX9 164 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 YIPF1Q9Y548 306 aa18.36■□□□□ 0.53
SNX17-209ENST00000494893 TNFRSF10AO00220 468 aa18.35■□□□□ 0.53
SNX17-209ENST00000494893 NRG2O14511 850 aaPredicted RBP18.35■□□□□ 0.53
SNX17-209ENST00000494893 ATP2C2O75185 946 aa18.35■□□□□ 0.53
SNX17-209ENST00000494893 SOAT2O75908 522 aa18.35■□□□□ 0.53
SNX17-209ENST00000494893 WARSP23381 471 aaKnown RBP18.35■□□□□ 0.53
SNX17-209ENST00000494893 ELF1P32519 619 aa18.35■□□□□ 0.53
SNX17-209ENST00000494893 SSTR3P32745 418 aaPredicted RBP18.35■□□□□ 0.53
SNX17-209ENST00000494893 PAK1Q13153 545 aa18.35■□□□□ 0.53
SNX17-209ENST00000494893 SPOPLQ6IQ16 392 aa18.35■□□□□ 0.53
SNX17-209ENST00000494893 GAS2L3Q86XJ1 694 aa18.35■□□□□ 0.53
SNX17-209ENST00000494893 CEP63Q96MT8 703 aa18.35■□□□□ 0.53
SNX17-209ENST00000494893 ACBD6Q9BR61 282 aa18.35■□□□□ 0.53
SNX17-209ENST00000494893 SMYD3Q9H7B4 428 aa18.35■□□□□ 0.53
SNX17-209ENST00000494893 APOBEC3GQ9HC16 384 aaKnown RBP18.35■□□□□ 0.53
SNX17-209ENST00000494893 CEP72Q9P209 647 aa18.35■□□□□ 0.53
SNX17-209ENST00000494893 SLC27A5Q9Y2P5 690 aa18.35■□□□□ 0.53
SNX17-209ENST00000494893 R3HCC1Q9Y3T6 440 aaKnown RBP18.35■□□□□ 0.53
SNX17-209ENST00000494893 TACC1O75410 805 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 ASS1P00966 412 aaKnown RBP18.34■□□□□ 0.53
SNX17-209ENST00000494893 LHX1P48742 406 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 TWF1Q12792 350 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 ZNF699Q32M78 642 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 INTS6LQ5JSJ4 861 aaKnown RBP18.34■□□□□ 0.53
SNX17-209ENST00000494893 POTEHQ6S545 545 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 FILIP1Q7Z7B0 1213 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 SEMA4DQ92854 862 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 SLC35C1Q96A29 364 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 MYADMQ96S97 322 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 MMS19Q96T76 1030 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 PI4K2AQ9BTU6 479 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 DNAJC25Q9H1X3 360 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 MMRN2Q9H8L6 949 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 PIDD1Q9HB75 910 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 TMEM8AQ9HCN3 771 aa18.34■□□□□ 0.53
SNX17-209ENST00000494893 NXF1Q9UBU9 619 aaKnown RBP18.34■□□□□ 0.53
SNX17-209ENST00000494893 MYBPHLA2RUH7 354 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 XYLBO75191 536 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 GTF2H1P32780 548 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 PIK3CAP42336 1068 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 RAP1GAPP47736 663 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 CDH8P55286 799 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 TNNC1P63316 161 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 MYL7Q01449 175 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 DPCR1Q3MIW9 517 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 CBWD6Q4V339 395 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 CBWD3Q5JTY5 395 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 CBWD5Q5RIA9 395 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 RNF135Q8IUD6 432 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 ITFG1Q8TB96 612 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 LPIN3Q9BQK8 851 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 CRTAC1Q9NQ79 661 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.33■□□□□ 0.525e-7■■■■■ 31.9
SNX17-209ENST00000494893 ARMCX3Q9UH62 379 aaPredicted RBP18.33■□□□□ 0.52
SNX17-209ENST00000494893 GTF3C4Q9UKN8 822 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 USTQ9Y2C2 406 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 NOTCH4Q99466 2003 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 NCOR1O75376 2440 aa18.33■□□□□ 0.52
SNX17-209ENST00000494893 BICDL2A1A5D9 508 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 CAVIN2O95810 425 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 LRG1P02750 347 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 PDGFRBP09619 1106 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 FAM163BP0C2L3 166 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 PSMC1P62191 440 aaKnown RBP18.32■□□□□ 0.52
SNX17-209ENST00000494893 TSPY1Q01534 308 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 GSE1Q14687 1217 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 SLC5A9Q2M3M2 681 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 SGSM1Q2NKQ1 1148 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 ANO6Q4KMQ2 910 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 ZNF667Q5HYK9 610 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 KRT39Q6A163 491 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 FAM171BQ6P995 826 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 SCARA5Q6ZMJ2 495 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 DCP1BQ8IZD4 617 aaKnown RBP18.32■□□□□ 0.52
SNX17-209ENST00000494893 HS6ST3Q8IZP7 471 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 MLKLQ8NB16 471 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 SYT15Q9BQS2 421 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 LRRC3Q9BY71 257 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 DPEP3Q9H4B8 488 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 HSFX1Q9UBD0 423 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 RWDD2AQ9UIY3 292 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 DOCK6Q96HP0 2047 aa18.32■□□□□ 0.52
SNX17-209ENST00000494893 RHOP08100 348 aa18.31■□□□□ 0.52
SNX17-209ENST00000494893 HAPLN1P10915 354 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms