RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SPPL2BQ8TCT7 592 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 TMEM174Q8WUU8 243 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 FAM84AQ96KN4 292 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 L1RE1Q9UN81 338 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 ASB3Q9Y575 518 aa14.18□□□□□ -0.14
ERCC3-209ENST00000494464 CLIC2O15247 247 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 HUS1O60921 280 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 ECI2O75521 394 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 CFHP08603 1231 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 KRT19P08727 400 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 ALDH1A3P47895 512 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 CYP2J2P51589 502 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 EPHB3P54753 998 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 BFSP1Q12934 665 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 MYO1EQ12965 1108 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 LMBRD2Q68DH5 695 aaPredicted RBP14.17□□□□□ -0.14
ERCC3-209ENST00000494464 ASTLQ6HA08 431 aaPredicted RBP14.17□□□□□ -0.14
ERCC3-209ENST00000494464 HS6ST3Q8IZP7 471 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 SIX5Q8N196 739 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 TTC9BQ8N6N2 239 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 PRSS33Q8NF86 280 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 PSMG2Q969U7 264 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 TCEAL4Q96EI5 215 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 FNBP1Q96RU3 617 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 CGRRF1Q99675 332 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 RPP25Q9BUL9 199 aaKnown RBP14.17□□□□□ -0.14
ERCC3-209ENST00000494464 LRRC3Q9BY71 257 aa14.17□□□□□ -0.14
ERCC3-209ENST00000494464 NUP210Q8TEM1 1887 aaPredicted RBP14.17□□□□□ -0.14
ERCC3-209ENST00000494464 COL4A2P08572 1712 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 KRBA1A5PL33 1030 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 MOSPD3O75425 235 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 RPN1P04843 607 aaKnown RBP14.16□□□□□ -0.14
ERCC3-209ENST00000494464 NPR3P17342 541 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 AOC1P19801 751 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 FCARP24071 287 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 TUFMP49411 452 aaKnown RBP14.16□□□□□ -0.14
ERCC3-209ENST00000494464 PTPN5P54829 565 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 TSPY1Q01534 308 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 NFE2Q16621 373 aaPredicted RBP14.16□□□□□ -0.14
ERCC3-209ENST00000494464 IER5LQ5T953 404 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 SCARA3Q6AZY7 606 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 POTEHQ6S545 545 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 KRBA2Q6ZNG9 492 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 DPH6Q7L8W6 267 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 ITIH5Q86UX2 942 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 SLC9A9Q8IVB4 645 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 DCP1BQ8IZD4 617 aaKnown RBP14.16□□□□□ -0.14
ERCC3-209ENST00000494464 TMEM105Q8N8V8 129 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 GPR152Q8TDT2 470 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 CCDC47Q96A33 483 aaKnown RBP14.16□□□□□ -0.14
ERCC3-209ENST00000494464 ELSPBP1Q96BH3 223 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 MCRS1Q96EZ8 462 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 KXD1Q9BQD3 176 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 ACBD6Q9BR61 282 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 ARHGEF3Q9NR81 526 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 R3HCC1Q9Y3T6 440 aaKnown RBP14.16□□□□□ -0.14
ERCC3-209ENST00000494464 SNX9Q9Y5X1 595 aa14.16□□□□□ -0.14
ERCC3-209ENST00000494464 TULP1O00294 542 aaPredicted RBP14.15□□□□□ -0.14
ERCC3-209ENST00000494464 NRG2O14511 850 aaPredicted RBP14.15□□□□□ -0.14
ERCC3-209ENST00000494464 GABRDO14764 452 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 EXOC3O60645 756 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 RHOBTB3O94955 611 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 FGF19O95750 216 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 PRR29P0C7W0 189 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 DLATP10515 647 aaKnown RBP14.15□□□□□ -0.14
ERCC3-209ENST00000494464 MYL4P12829 197 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 ATF6P18850 670 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 TNNI1P19237 187 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 LHX1P48742 406 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 MYL7Q01449 175 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 DPYDQ12882 1025 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 VEPH1Q14D04 833 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 ANO6Q4KMQ2 910 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 INTS6LQ5JSJ4 861 aaKnown RBP14.15□□□□□ -0.14
ERCC3-209ENST00000494464 TRAPPC11Q7Z392 1133 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 LIMS2Q7Z4I7 341 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 LRRTM3Q86VH5 581 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 ADGRF2Q8IZF7 708 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 RDH13Q8NBN7 331 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 ST13P5Q8NFI4 369 aaPredicted RBP14.15□□□□□ -0.14
ERCC3-209ENST00000494464 SHKBP1Q8TBC3 707 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 HPDLQ96IR7 371 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 ASB16Q96NS5 453 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 GPR88Q9GZN0 384 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 KCTD10Q9H3F6 313 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 ANO10Q9NW15 660 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 DDX43Q9NXZ2 648 aaKnown RBP14.15□□□□□ -0.14
ERCC3-209ENST00000494464 KIAA1468Q9P260 1216 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 SLC27A5Q9Y2P5 690 aa14.15□□□□□ -0.14
ERCC3-209ENST00000494464 OBSL1O75147 1896 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 PDXKO00764 312 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 KIF20AO95235 890 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 STAU1O95793 577 aaKnown RBP14.14□□□□□ -0.15
ERCC3-209ENST00000494464 HAPLN1P10915 354 aaPredicted RBP14.14□□□□□ -0.15
ERCC3-209ENST00000494464 PCSK1P29120 753 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 GPC5P78333 572 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 PFKPQ01813 784 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 NHLH1Q02575 133 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 TCF15Q12870 199 aa14.14□□□□□ -0.15
ERCC3-209ENST00000494464 KCNB1Q14721 858 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms