RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 FAM228AQ86W67 206 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 DDX42Q86XP3 938 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLCN6-208ENST00000494028 RHOT1Q8IXI2 618 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 KATNAL2Q8IYT4 538 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 LRRC52Q8N7C0 313 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 NIPA2Q8N8Q9 360 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 IFT81Q8WYA0 676 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLCN6-208ENST00000494028 CCDC102AQ96A19 550 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 HHIPL1Q96JK4 782 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 LHX5Q9H2C1 402 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 DPH5Q9H2P9 285 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 IP6K2Q9UHH9 426 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 ABT1Q9ULW3 272 aaKnown RBP11.29□□□□□ -0.6
CLCN6-208ENST00000494028 GABRQQ9UN88 632 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 FAN1Q9Y2M0 1017 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 HES2Q9Y543 173 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 NME7Q9Y5B8 376 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 PATJQ8NI35 1801 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 GOLGA6BA6NDN3 693 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 M0QYV0 167 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 FSCN2O14926 492 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 DAPK3O43293 454 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 RNF40O75150 1001 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 KRT1P04264 644 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 ERBB2P04626 1255 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 C6orf222P0C671 652 aaPredicted RBP11.28□□□□□ -0.6
CLCN6-208ENST00000494028 VDRP11473 427 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 TCF4P15884 667 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 GJC1P36383 396 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 NDST1P52848 882 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 CRYBB1P53674 252 aaPredicted RBP11.28□□□□□ -0.6
CLCN6-208ENST00000494028 YARSP54577 528 aaKnown RBP11.28□□□□□ -0.6
CLCN6-208ENST00000494028 NKX3-2P78367 333 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 PDCLQ13371 301 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 XKR4Q5GH76 650 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 DUPD1Q68J44 220 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 ZDHHC24Q6UX98 284 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 BEST2Q8NFU1 509 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 RIN2Q8WYP3 895 aaPredicted RBP11.28□□□□□ -0.6
CLCN6-208ENST00000494028 SLCO2A1Q92959 643 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 C18orf25Q96B23 403 aaPredicted RBP11.28□□□□□ -0.6
CLCN6-208ENST00000494028 ZBTB9Q96C00 473 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 TMEM176AQ96HP8 235 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 RUNDC3BQ96NL0 473 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 CPXM1Q96SM3 734 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 SH3GL2Q99962 352 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 MTG1Q9BT17 334 aaPredicted RBP11.28□□□□□ -0.6
CLCN6-208ENST00000494028 PLVAPQ9BX97 442 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 FAM114A2Q9NRY5 505 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 GRHL1Q9NZI5 618 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 PCYOX1Q9UHG3 505 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 LCMT1Q9UIC8 334 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 RASAL2Q9UJF2 1139 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 MTUS1Q9ULD2 1270 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 STRIP2Q9ULQ0 834 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 BARX2Q9UMQ3 279 aaPredicted RBP11.28□□□□□ -0.6
CLCN6-208ENST00000494028 USTQ9Y2C2 406 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 TRPV2Q9Y5S1 764 aa11.28□□□□□ -0.6
CLCN6-208ENST00000494028 TDRD15B5MCY1 1934 aaKnown RBP11.28□□□□□ -0.6
CLCN6-208ENST00000494028 ADAMTS4O75173 837 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 COILP38432 576 aaPredicted RBP11.27□□□□□ -0.61
CLCN6-208ENST00000494028 GGCXP38435 758 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 FAM193AP78312 1265 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 MRPS6P82932 125 aaKnown RBP11.27□□□□□ -0.61
CLCN6-208ENST00000494028 CAP1Q01518 475 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 PRKCZQ05513 592 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 TRIM32Q13049 653 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 KLF1Q13351 362 aaPredicted RBP11.27□□□□□ -0.61
CLCN6-208ENST00000494028 TERF2Q15554 542 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 UAP1Q16222 522 aaPredicted RBP11.27□□□□□ -0.61
CLCN6-208ENST00000494028 GOLGA7BQ2TAP0 167 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 SGO2Q562F6 1265 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 MFSD14CQ5VZR4 134 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 C9orf57Q5W0N0 161 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 CYP4F22Q6NT55 531 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 TAF2Q6P1X5 1199 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 ALKAL1Q6UXT8 129 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 ANKS1BQ7Z6G8 1248 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 ERICH1Q86X53 443 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 XYLT1Q86Y38 959 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 TTC39CQ8N584 583 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 C7orf31Q8N865 590 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 EXD1Q8NHP7 514 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 JOSD2Q8TAC2 188 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 PIK3R5Q8WYR1 880 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 WNT8BQ93098 351 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 MAGOHBQ96A72 148 aaKnown RBP11.27□□□□□ -0.61
CLCN6-208ENST00000494028 ZIM3Q96PE6 472 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 MRPL45Q9BRJ2 306 aaKnown RBP11.27□□□□□ -0.61
CLCN6-208ENST00000494028 APOL6Q9BWW8 343 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 LRRC19Q9H756 370 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 METTL5Q9NRN9 209 aaKnown RBP11.27□□□□□ -0.61
CLCN6-208ENST00000494028 ZDHHC18Q9NUE0 388 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 KLHL11Q9NVR0 708 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 VPS18Q9P253 973 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 GTF2IRD1Q9UHL9 959 aa11.27□□□□□ -0.61
CLCN6-208ENST00000494028 UBQLN1Q9UMX0 589 aaKnown RBP11.27□□□□□ -0.61
CLCN6-208ENST00000494028 UTP11Q9Y3A2 253 aaKnown RBP11.27□□□□□ -0.61
CLCN6-208ENST00000494028 GOLGA8SH3BPF8 625 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms