RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 LIN9Q5TKA1 542 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 MAP1SQ66K74 1059 aaPredicted RBP10.72□□□□□ -0.69
PRPF3-206ENST00000493553 GPR142Q7Z601 462 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 DAAM2Q86T65 1068 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 FAM35AQ86V20 835 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 ZNF410Q86VK4 478 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 NT5DC4Q86YG4 428 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 CD302Q8IX05 232 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 RNF149Q8NC42 400 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 PLEKHO2Q8TD55 490 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 HELQQ8TDG4 1101 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 TAS1R2Q8TE23 839 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 CAPZA3Q96KX2 299 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 ACO2Q99798 780 aaKnown RBP10.72□□□□□ -0.69
PRPF3-206ENST00000493553 TARS2Q9BW92 718 aaKnown RBP10.72□□□□□ -0.69
PRPF3-206ENST00000493553 DNAI2Q9GZS0 605 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 CARD9Q9H257 536 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 VIPAS39Q9H9C1 493 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 ANKFY1Q9P2R3 1169 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 GTF3C4Q9UKN8 822 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 ADGRA2Q96PE1 1338 aa10.72□□□□□ -0.69
PRPF3-206ENST00000493553 GOLGA6L10A0A0M3HER8 536 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 ZBTB42B2RXF5 422 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 LRRN2O75325 713 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 FTLP02792 175 aaPredicted RBP10.71□□□□□ -0.69
PRPF3-206ENST00000493553 LGALS2P05162 132 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 P4HA1P13674 534 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 CYP11B1P15538 503 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 TNFRSF8P28908 595 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 CHRNA4P43681 627 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 SOX10P56693 466 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 TRPC3Q13507 836 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 LONRF2Q1L5Z9 754 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 SGSM1Q2NKQ1 1148 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 ATF7IP2Q5U623 682 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 EFCAB12Q6NXP0 572 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 TAPT1Q6NXT6 567 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 ARHGEF19Q8IW93 802 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 IFT20Q8IY31 132 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 RPUSD2Q8IZ73 545 aaKnown RBP10.71□□□□□ -0.69
PRPF3-206ENST00000493553 LRRN4CLQ8ND94 238 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 LNX1Q8TBB1 728 aaPredicted RBP10.71□□□□□ -0.69
PRPF3-206ENST00000493553 SLC35G2Q8TBE7 412 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 NUDT8Q8WV74 236 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 ANKRD36BP1Q96IX9 119 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 RUNDC3BQ96NL0 473 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 TSPAN18Q96SJ8 248 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 TINF2Q9BSI4 451 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 INO80BQ9C086 356 aaPredicted RBP10.71□□□□□ -0.69
PRPF3-206ENST00000493553 ASB7Q9H672 318 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 ANKZF1Q9H8Y5 726 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 CTTNBP2NLQ9P2B4 639 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 SEPT3Q9UH03 358 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 NOCTQ9UK39 431 aaKnown RBP10.71□□□□□ -0.69
PRPF3-206ENST00000493553 CNTN6Q9UQ52 1028 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 Q9Y3F1 56 aa10.71□□□□□ -0.69
PRPF3-206ENST00000493553 TMCO5BA8MYB1 307 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 INO80B-WBP1J3KQ70 363 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 KCNK3O14649 394 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 SORBS3O60504 671 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 B4GALT4O60513 344 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 KPNA6O60684 536 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 RGS9O75916 674 aaPredicted RBP10.7□□□□□ -0.7
PRPF3-206ENST00000493553 C22orf31O95567 290 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 LSM8O95777 96 aaKnown RBP10.7□□□□□ -0.7
PRPF3-206ENST00000493553 RPLP2P05387 115 aaKnown RBP10.7□□□□□ -0.7
PRPF3-206ENST00000493553 RHOXF2BP0C7M4 288 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 PNMA6AP0CW24 399 aaPredicted RBP10.7□□□□□ -0.7
PRPF3-206ENST00000493553 SRGAP2CP0DJJ0 459 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 KRT5P13647 590 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 ZSCAN20P17040 1043 aaPredicted RBP10.7□□□□□ -0.7
PRPF3-206ENST00000493553 PROZP22891 400 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 GBP1P32455 592 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 AFF1P51825 1210 aaKnown RBP10.7□□□□□ -0.7
PRPF3-206ENST00000493553 NLRP11P59045 1033 aaKnown RBP10.7□□□□□ -0.7
PRPF3-206ENST00000493553 CUL2Q13617 745 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 ACVR2BQ13705 512 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 TRIP4Q15650 581 aaPredicted RBP10.7□□□□□ -0.7
PRPF3-206ENST00000493553 ZNF568Q3ZCX4 644 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 ACAD10Q6JQN1 1059 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 C8orf74Q6P047 294 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 NFRKBQ6P4R8 1299 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 EMBQ6PCB8 327 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 MAATS1Q7Z4T9 603 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 RHPN2Q8IUC4 686 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 METTL13Q8N6R0 699 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 CCDC26Q8TAB7 109 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 MAIP1Q8WWC4 291 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 SOCS4Q8WXH5 440 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 PIK3R5Q8WYR1 880 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 SEMA4DQ92854 862 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 HES6Q96HZ4 224 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 MAML3Q96JK9 1138 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 KREMEN1Q96MU8 473 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 RHOXF2Q9BQY4 288 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.7□□□□□ -0.73e-6■□□□□ 10.1
PRPF3-206ENST00000493553 ADPGKQ9BRR6 497 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 PACSIN1Q9BY11 444 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 ZNF518BQ9C0D4 1074 aa10.7□□□□□ -0.7
PRPF3-206ENST00000493553 WNT8AQ9H1J5 351 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms