RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 VNN1O95497 513 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 GLUD1P00367 558 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 HLA-DRAP01903 254 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 CCDC192P0DO97 292 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 NBL1P41271 181 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 CLCN5P51795 746 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 ARPP19P56211 112 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 TNNC1P63316 161 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 FOXK2Q01167 660 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 MYL7Q01449 175 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 WSCD1Q658N2 575 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 TMC5Q6UXY8 1006 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 CCDC149Q6ZUS6 474 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 PALB2Q86YC2 1186 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 FAM114A1Q8IWE2 563 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 SLC35C1Q96A29 364 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 MED15Q96RN5 788 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 IMPG2Q9BZV3 1241 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 DNAJC25Q9H1X3 360 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 SMOC2Q9H3U7 446 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 DSEQ9UL01 958 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 BACE2Q9Y5Z0 518 aa12.43□□□□□ -0.42
CTSA-209ENST00000493522 MYO16Q9Y6X6 1858 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 DOCK6Q96HP0 2047 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 PRR23AA6NEV1 266 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 ADAM12O43184 909 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 LETM1O95202 739 aaPredicted RBP12.42□□□□□ -0.42
CTSA-209ENST00000493522 CST3P01034 146 aaPredicted RBP12.42□□□□□ -0.42
CTSA-209ENST00000493522 CPB1P15086 417 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 ATICP31939 592 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 GTF2H1P32780 548 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 OR1D2P34982 312 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 CLCN4P51793 760 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 WDR72Q3MJ13 1102 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 ANO6Q4KMQ2 910 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 ZNF667Q5HYK9 610 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 CT47A1Q5JQC4 288 aaPredicted RBP12.42□□□□□ -0.42
CTSA-209ENST00000493522 KRT39Q6A163 491 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 SCARA5Q6ZMJ2 495 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 C15orf39Q6ZRI6 1047 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 OTOP3Q7RTS5 596 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 ASCL5Q7RTU5 278 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 ADGRF2Q8IZF7 708 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 PDCL2Q8N4E4 241 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 CCDC150Q8NCX0 1101 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 TAS1R2Q8TE23 839 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 SLC22A17Q8WUG5 538 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 ELMO3Q96BJ8 720 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 MMS19Q96T76 1030 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 CLSTN3Q9BQT9 956 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.42□□□□□ -0.42
CTSA-209ENST00000493522 MAN1C1Q9NR34 630 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 GDAP2Q9NXN4 497 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 MAGEC2Q9UBF1 373 aaPredicted RBP12.42□□□□□ -0.42
CTSA-209ENST00000493522 NXF1Q9UBU9 619 aaKnown RBP12.42□□□□□ -0.42
CTSA-209ENST00000493522 FBXL5Q9UKA1 691 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 L1RE1Q9UN81 338 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 POLIQ9UNA4 740 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 WDR87Q6ZQQ6 2873 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 OBSL1O75147 1896 aa12.42□□□□□ -0.42
CTSA-209ENST00000493522 PATJQ8NI35 1801 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 FAM186AA6NE01 2351 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 N4BP1O75113 896 aaKnown RBP12.41□□□□□ -0.42
CTSA-209ENST00000493522 STAU1O95793 577 aaKnown RBP12.41□□□□□ -0.42
CTSA-209ENST00000493522 CYP11A1P05108 521 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 MTIF2P46199 727 aaKnown RBP12.41□□□□□ -0.42
CTSA-209ENST00000493522 MARSP56192 900 aaKnown RBP12.41□□□□□ -0.42
CTSA-209ENST00000493522 NOP14P78316 857 aaKnown RBP12.41□□□□□ -0.42
CTSA-209ENST00000493522 ROR1Q01973 937 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 CBWD6Q4V339 395 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 HSP90AA4PQ58FG1 418 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 CBWD3Q5JTY5 395 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 CBWD5Q5RIA9 395 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 ELMSAN1Q6PJG2 1045 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 RSPO2Q6UXX9 243 aaPredicted RBP12.41□□□□□ -0.42
CTSA-209ENST00000493522 GPR149Q86SP6 731 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 TRIM59Q8IWR1 403 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 THEM5Q8N1Q8 247 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 TMEM86AQ8N2M4 240 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 TOP6BLQ8N6T0 577 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 FLCNQ8NFG4 579 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 NKD2Q969F2 451 aaPredicted RBP12.41□□□□□ -0.42
CTSA-209ENST00000493522 PI4K2AQ9BTU6 479 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 XYLT2Q9H1B5 865 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 THAP9Q9H5L6 903 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 NFE2L3Q9Y4A8 694 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.41□□□□□ -0.42
CTSA-209ENST00000493522 GREB1Q4ZG55 1949 aa12.41□□□□□ -0.42
CTSA-209ENST00000493522 ZNF638Q14966 1978 aaKnown RBP12.4□□□□□ -0.42
CTSA-209ENST00000493522 OR6C75A6NL08 312 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 TGM5O43548 720 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 OAZ2O95190 189 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 ASS1P00966 412 aaKnown RBP12.4□□□□□ -0.42
CTSA-209ENST00000493522 AFPP02771 609 aaKnown RBP12.4□□□□□ -0.42
CTSA-209ENST00000493522 OR4Q2P0C623 313 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 SPATA31D3P0C874 917 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 P4HA1P13674 534 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 RAP1GAPP47736 663 aa12.4□□□□□ -0.42
CTSA-209ENST00000493522 FMO5P49326 533 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms