RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 AVPR1AP37288 418 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 LIG4P49917 911 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 GUCY2FP51841 1108 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 NCKAP1LP55160 1127 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 KARSQ15046 597 aaKnown RBP19.14■□□□□ 0.65
NUP50-218ENST00000493456 HYIQ5T013 277 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 RNF43Q68DV7 783 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 CCDC83Q8IWF9 413 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 SYT2Q8N9I0 419 aaPredicted RBP19.14■□□□□ 0.65
NUP50-218ENST00000493456 EXOC4Q96A65 974 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 SLC46A2Q9BY10 475 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 ZCWPW1Q9H0M4 648 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 HPS4Q9NQG7 708 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 PCDHB6Q9Y5E3 794 aa19.14■□□□□ 0.65
NUP50-218ENST00000493456 PPEF2O14830 753 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 HNRNPDLO14979 420 aaKnown RBP19.13■□□□□ 0.65
NUP50-218ENST00000493456 OGTO15294 1046 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 FAM189A1O60320 539 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 RNF40O75150 1001 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 DRD1P21728 446 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 CDC25AP30304 524 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 TOB1P50616 345 aaPredicted RBP19.13■□□□□ 0.65
NUP50-218ENST00000493456 BFSP1Q12934 665 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 ELF2Q15723 593 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 PLK5Q496M5 336 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 FBXO43Q4G163 708 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 FAM184AQ8NB25 1140 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 SPPL2BQ8TCT7 592 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 SMG9Q9H0W8 520 aaKnown RBP19.13■□□□□ 0.65
NUP50-218ENST00000493456 SMOC1Q9H4F8 434 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 LIMCH1Q9UPQ0 1083 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 MYH11P35749 1972 aa19.13■□□□□ 0.65
NUP50-218ENST00000493456 CACNA1GO43497 2377 aa19.12■□□□□ 0.65
NUP50-218ENST00000493456 SOBPA7XYQ1 873 aa19.12■□□□□ 0.65
NUP50-218ENST00000493456 RHOBTB1O94844 696 aa19.12■□□□□ 0.65
NUP50-218ENST00000493456 PIGRP01833 764 aa19.12■□□□□ 0.65
NUP50-218ENST00000493456 SLC12A3P55017 1021 aa19.12■□□□□ 0.65
NUP50-218ENST00000493456 IL17AQ16552 155 aa19.12■□□□□ 0.65
NUP50-218ENST00000493456 C9orf57Q5W0N0 161 aa19.12■□□□□ 0.65
NUP50-218ENST00000493456 PSAPL1Q6NUJ1 521 aa19.12■□□□□ 0.65
NUP50-218ENST00000493456 METTL23Q86XA0 190 aa19.12■□□□□ 0.65
NUP50-218ENST00000493456 CHFRQ96EP1 664 aa19.12■□□□□ 0.65
NUP50-218ENST00000493456 EDEM2Q9BV94 578 aa19.12■□□□□ 0.65
NUP50-218ENST00000493456 EBF3Q9H4W6 596 aa19.12■□□□□ 0.65
NUP50-218ENST00000493456 DERAQ9Y315 318 aa19.12■□□□□ 0.65
NUP50-218ENST00000493456 SDK1Q7Z5N4 2213 aa19.11■□□□□ 0.65
NUP50-218ENST00000493456 PIRO00625 290 aa19.11■□□□□ 0.65
NUP50-218ENST00000493456 EIF5BO60841 1220 aaKnown RBP19.11■□□□□ 0.65
NUP50-218ENST00000493456 EGFP01133 1207 aa19.11■□□□□ 0.65
NUP50-218ENST00000493456 TMEM132DQ14C87 1099 aa19.11■□□□□ 0.65
NUP50-218ENST00000493456 ZRSR1Q15695 479 aaKnown RBP19.11■□□□□ 0.65
NUP50-218ENST00000493456 TRIM68Q6AZZ1 485 aa19.11■□□□□ 0.65
NUP50-218ENST00000493456 JADE1Q6IE81 842 aa19.11■□□□□ 0.65
NUP50-218ENST00000493456 CC2D1AQ6P1N0 951 aaPredicted RBP19.11■□□□□ 0.65
NUP50-218ENST00000493456 THEM5Q8N1Q8 247 aa19.11■□□□□ 0.65
NUP50-218ENST00000493456 USP13Q92995 863 aaPredicted RBP19.11■□□□□ 0.65
NUP50-218ENST00000493456 HHIPQ96QV1 700 aa19.11■□□□□ 0.65
NUP50-218ENST00000493456 DUSP15Q9H1R2 295 aaPredicted RBP19.11■□□□□ 0.65
NUP50-218ENST00000493456 TDP1Q9NUW8 608 aa19.11■□□□□ 0.65
NUP50-218ENST00000493456 EBF1Q9UH73 591 aa19.11■□□□□ 0.65
NUP50-218ENST00000493456 CCL26Q9Y258 94 aa19.11■□□□□ 0.65
NUP50-218ENST00000493456 EML5Q05BV3 1969 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 A0A0B4J269 797 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 ANO9A1A5B4 782 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 OTOL1A6NHN0 477 aaPredicted RBP19.1■□□□□ 0.65
NUP50-218ENST00000493456 APBB3O95704 486 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 HAPLN1P10915 354 aaPredicted RBP19.1■□□□□ 0.65
NUP50-218ENST00000493456 NOVA1P51513 510 aaKnown RBP19.1■□□□□ 0.65
NUP50-218ENST00000493456 NLRP12P59046 1061 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 ZNF268Q14587 947 aaPredicted RBP19.1■□□□□ 0.65
NUP50-218ENST00000493456 PDGFRLQ15198 375 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 SYT13Q7L8C5 426 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 MAB21L3Q8N8X9 362 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 GIPC2Q8TF65 315 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 ACDQ96AP0 544 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 FAM212AQ96EL1 285 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 PNMA5Q96PV4 448 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 P2RY13Q9BPV8 354 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 MSTO1Q9BUK6 570 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 CPSF3Q9UKF6 684 aaKnown RBP19.1■□□□□ 0.65
NUP50-218ENST00000493456 ODF2LQ9ULJ1 636 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 TBX20Q9UMR3 447 aa19.1■□□□□ 0.65
NUP50-218ENST00000493456 F11P03951 625 aa19.09■□□□□ 0.65
NUP50-218ENST00000493456 NFICP08651 508 aa19.09■□□□□ 0.65
NUP50-218ENST00000493456 PLA2G4BP0C869 781 aa19.09■□□□□ 0.65
NUP50-218ENST00000493456 DAB2IPQ5VWQ8 1189 aa19.09■□□□□ 0.65
NUP50-218ENST00000493456 TCEAL6Q6IPX3 200 aa19.09■□□□□ 0.65
NUP50-218ENST00000493456 UNQ6494/PRO21346Q6UXR6 183 aa19.09■□□□□ 0.65
NUP50-218ENST00000493456 TMEM150AQ86TG1 271 aa19.09■□□□□ 0.65
NUP50-218ENST00000493456 C11orf74Q86VG3 221 aa19.09■□□□□ 0.65
NUP50-218ENST00000493456 DCP1BQ8IZD4 617 aaKnown RBP19.09■□□□□ 0.65
NUP50-218ENST00000493456 MRPS31Q92665 395 aaKnown RBP19.09■□□□□ 0.65
NUP50-218ENST00000493456 TCEAL3Q969E4 200 aa19.09■□□□□ 0.65
NUP50-218ENST00000493456 CDK5RAP3Q96JB5 506 aa19.09■□□□□ 0.65
NUP50-218ENST00000493456 ASB7Q9H672 318 aa19.09■□□□□ 0.65
NUP50-218ENST00000493456 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.09■□□□□ 0.65
NUP50-218ENST00000493456 ABI2Q9NYB9 513 aaPredicted RBP19.09■□□□□ 0.65
NUP50-218ENST00000493456 C2CD2Q9Y426 696 aa19.09■□□□□ 0.65
NUP50-218ENST00000493456 K7ENM7 598 aa19.08■□□□□ 0.64
NUP50-218ENST00000493456 CYB561D2O14569 222 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms