RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 TOB1P50616 345 aaPredicted RBP11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 SLC12A3P55017 1021 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 SPAG1Q07617 926 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 TNK2Q07912 1038 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 BFSP1Q12934 665 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 ZNF268Q14587 947 aaPredicted RBP11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 PDGFRLQ15198 375 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 SF3A2Q15428 464 aaKnown RBP11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 ENOX2Q16206 610 aaKnown RBP11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 SLC39A12Q504Y0 691 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 RILPL1Q5EBL4 403 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 CC2D1AQ6P1N0 951 aaPredicted RBP11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 KCNK18Q7Z418 384 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 KBTBD6Q86V97 674 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 DCP1BQ8IZD4 617 aaKnown RBP11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 TTC8Q8TAM2 541 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 ACDQ96AP0 544 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 MMTAG2Q9BU76 263 aaKnown RBP11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 SLC46A2Q9BY10 475 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 CCSER1Q9C0I3 900 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 GKN1Q9NS71 199 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 C2orf42Q9NWW7 574 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 EBF1Q9UH73 591 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 C2CD2Q9Y426 696 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 CFAP47Q6ZTR5 3102 aa11.9□□□□□ -0.5
SNRNP200-207ENST00000493271 KIF26AQ9ULI4 1882 aaPredicted RBP11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 A0A0B4J269 797 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 KCNK5O95279 499 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 PLA2G4BP0C869 781 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 CSH1P0DML2 217 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 CSH2P0DML3 217 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 TNFSF9P41273 254 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 CYP4F8P98187 520 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 RAD51AP2Q09MP3 1159 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 NBR1Q14596 966 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 TMEM132DQ14C87 1099 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 C9orf57Q5W0N0 161 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 ARL6IP4Q66PJ3 421 aaKnown RBP11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 RNF43Q68DV7 783 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 FSTL4Q6MZW2 842 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 SYT13Q7L8C5 426 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 NT5DC4Q86YG4 428 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 TTC9BQ8N6N2 239 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 OR10T2Q8NGX3 314 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 MRPS31Q92665 395 aaKnown RBP11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 AK8Q96MA6 479 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 MSTO1Q9BUK6 570 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 HAPLN2Q9GZV7 340 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 TDP1Q9NUW8 608 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 UXTQ9UBK9 157 aaPredicted RBP11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 CPSF3Q9UKF6 684 aaKnown RBP11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 TBX20Q9UMR3 447 aa11.89□□□□□ -0.51
SNRNP200-207ENST00000493271 APBB3O95704 486 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 PROS1P07225 676 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 HAPLN1P10915 354 aaPredicted RBP11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 TAF6P49848 677 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 ZNF131P52739 623 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 NLRP12P59046 1061 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 ATP2C1P98194 919 aaPredicted RBP11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 ZRSR1Q15695 479 aaKnown RBP11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 NFE2Q16621 373 aaPredicted RBP11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 PLK5Q496M5 336 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 DAB2IPQ5VWQ8 1189 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 JADE1Q6IE81 842 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 SLFN12LQ6IEE8 588 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 GPIHBP1Q8IV16 184 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 CPA6Q8N4T0 437 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 P2RY13Q9BPV8 354 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 LPIN3Q9BQK8 851 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 PARVGQ9HBI0 331 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 HPS4Q9NQG7 708 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 PCDHB5Q9Y5E4 795 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 GTF3C3Q9Y5Q9 886 aa11.88□□□□□ -0.51
SNRNP200-207ENST00000493271 CNOT1A5YKK6 2376 aaKnown RBP11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 K7ENM7 598 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 CYB561D2O14569 222 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 PPEF2O14830 753 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 TRAK2O60296 914 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 RNF40O75150 1001 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 SOAT2O75908 522 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 F11P03951 625 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 PNPLA4P41247 253 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 TSPY1Q01534 308 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 FAM160A1Q05DH4 1040 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 IL17AQ16552 155 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 SV2CQ496J9 727 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 TMEM119Q4V9L6 283 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 PKN3Q6P5Z2 889 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 MON1AQ86VX9 555 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 MAB21L3Q8N8X9 362 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 USP13Q92995 863 aaPredicted RBP11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 ATP2A3Q93084 1043 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 FAM212AQ96EL1 285 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 TRMT2BQ96GJ1 504 aaKnown RBP11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 ZNF560Q96MR9 790 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 PNMA5Q96PV4 448 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 EDEM2Q9BV94 578 aa11.87□□□□□ -0.51
SNRNP200-207ENST00000493271 DUSP15Q9H1R2 295 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms