RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 IRAK4Q9NWZ3 460 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 ZNF212Q9UDV6 495 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 SRRDQ9UH36 339 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 CDC42EP3Q9UKI2 254 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 ABT1Q9ULW3 272 aaKnown RBP3.52□□□□□ -1.85
SNX13-209ENST00000492626 VWA7Q9Y334 891 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 KDRP35968 1356 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 DYRK3O43781 588 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 GDF11O95390 407 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 LY86O95711 162 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 PIK3CGP48736 1102 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 SOX8P57073 446 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 KCTD2Q14681 263 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 C19orf54Q5BKX5 351 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 FAAH2Q6GMR7 532 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 SPRED2Q7Z698 418 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 TTC30AQ86WT1 665 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 YAF2Q8IY57 180 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 OR5M3Q8NGP4 307 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 ZSCAN18Q8TBC5 510 aaPredicted RBP3.52□□□□□ -1.85
SNX13-209ENST00000492626 ZSWIM3Q96MP5 696 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 PRDM12Q9H4Q4 367 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 L2HGDHQ9H9P8 463 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 RRN3Q9NYV6 651 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 CCDC39Q9UFE4 941 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 RUVBL1Q9Y265 456 aaKnown RBP3.52□□□□□ -1.85
SNX13-209ENST00000492626 NUP155O75694 1391 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 ANKRD31Q8N7Z5 1873 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 ZNF541Q9H0D2 1346 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 IRS2Q9Y4H2 1338 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 KLRG2A4D1S0 409 aaPredicted RBP3.52□□□□□ -1.85
SNX13-209ENST00000492626 GOLGA6L3A6NEY3 463 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 LRRC14BA6NHZ5 514 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 PRR19A6NJB7 356 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 NCK2O43639 380 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 SEC24DO94855 1032 aaPredicted RBP3.52□□□□□ -1.85
SNX13-209ENST00000492626 CHGBP05060 677 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 CD1AP06126 327 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 ANXA2P07355 339 aaKnown RBP3.52□□□□□ -1.85
SNX13-209ENST00000492626 HARSP12081 509 aaKnown RBP3.52□□□□□ -1.85
SNX13-209ENST00000492626 EDNRBP24530 442 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 SSTR4P31391 388 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 EPHX2P34913 555 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 ARFIP2P53365 341 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 POLE2P56282 527 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 IL13RA1P78552 427 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 UBE3CQ15386 1083 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 GATAD2AQ86YP4 633 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 IRF2BP1Q8IU81 584 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 NKAPQ8N5F7 415 aaKnown RBP3.52□□□□□ -1.85
SNX13-209ENST00000492626 ATG16L2Q8NAA4 619 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 IL31RAQ8NI17 732 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 SKA1Q96BD8 255 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 RMDN3Q96TC7 470 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 BRIP1Q9BX63 1249 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 MAGEB5Q9BZ81 275 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 DACT1Q9NYF0 836 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 WASF3Q9UPY6 502 aa3.52□□□□□ -1.85
SNX13-209ENST00000492626 MSTNO14793 375 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 ALAS1P13196 640 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 CRHR1P34998 444 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 ALDH9A1P49189 494 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 SRSF3P84103 164 aaKnown RBP3.51□□□□□ -1.85
SNX13-209ENST00000492626 FMO1Q01740 532 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 SLC13A2Q13183 592 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 KCNMB1Q16558 191 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 RGMBQ6NW40 437 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 LIPIQ6XZB0 460 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 CPA5Q8WXQ8 436 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 SAMD11Q96NU1 681 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 NT5C1BQ96P26 610 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 TTLL2Q9BWV7 592 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 HDAC5Q9UQL6 1122 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.51□□□□□ -1.85
SNX13-209ENST00000492626 COL11A2P13942 1736 aaPredicted RBP3.51□□□□□ -1.85
SNX13-209ENST00000492626 PODXLO00592 558 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 KIAA0391O15091 583 aaKnown RBP3.51□□□□□ -1.85
SNX13-209ENST00000492626 MAFO75444 373 aaPredicted RBP3.51□□□□□ -1.85
SNX13-209ENST00000492626 DPEP1P16444 411 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 HSPA7P48741 367 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 NOMO3P69849 1222 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 DSC2Q02487 901 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 RASSF7Q02833 373 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 PMS2P11Q13670 270 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 DACT2Q5SW24 774 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 LDHAL6AQ6ZMR3 332 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 TAS1R1Q7RTX1 841 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 CCDC117Q8IWD4 279 aaPredicted RBP3.51□□□□□ -1.85
SNX13-209ENST00000492626 MOGAT1Q96PD6 335 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 SEPSECSQ9HD40 501 aaKnown RBP3.51□□□□□ -1.85
SNX13-209ENST00000492626 SIDT1Q9NXL6 827 aaKnown RBP3.51□□□□□ -1.85
SNX13-209ENST00000492626 SLC39A10Q9ULF5 831 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 PCDHB1Q9Y5F3 818 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 RBM8AQ9Y5S9 174 aaKnown RBP3.51□□□□□ -1.85
SNX13-209ENST00000492626 LRRFIP2Q9Y608 721 aaKnown RBP3.51□□□□□ -1.85
SNX13-209ENST00000492626 FGF18O76093 207 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 EN2P19622 333 aaPredicted RBP3.51□□□□□ -1.85
SNX13-209ENST00000492626 TMF1P82094 1093 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 PPP3CAQ08209 521 aa3.51□□□□□ -1.85
SNX13-209ENST00000492626 ZACNQ401N2 412 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms