RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 CBWD2Q8IUF1 395 aa15.81■□□□□ 0.12
SS18L1-205ENST00000492466 EFCAB13Q8IY85 973 aa15.81■□□□□ 0.12
SS18L1-205ENST00000492466 HS6ST3Q8IZP7 471 aa15.81■□□□□ 0.12
SS18L1-205ENST00000492466 ZNF687Q8N1G0 1237 aa15.81■□□□□ 0.12
SS18L1-205ENST00000492466 CLDN23Q96B33 292 aa15.81■□□□□ 0.12
SS18L1-205ENST00000492466 ZSWIM3Q96MP5 696 aa15.81■□□□□ 0.12
SS18L1-205ENST00000492466 TIGD1Q96MW7 591 aa15.81■□□□□ 0.12
SS18L1-205ENST00000492466 GBP4Q96PP9 640 aa15.81■□□□□ 0.12
SS18L1-205ENST00000492466 PDE11AQ9HCR9 933 aa15.81■□□□□ 0.12
SS18L1-205ENST00000492466 LTB4R2Q9NPC1 389 aa15.81■□□□□ 0.12
SS18L1-205ENST00000492466 MAPK8IP1Q9UQF2 711 aa15.81■□□□□ 0.12
SS18L1-205ENST00000492466 PATJQ8NI35 1801 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 FAM170BA6NMN3 283 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 TGFB1I1O43294 461 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 DLATP10515 647 aaKnown RBP15.8■□□□□ 0.12
SS18L1-205ENST00000492466 TNNI1P19237 187 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 TARSP26639 723 aaKnown RBP15.8■□□□□ 0.12
SS18L1-205ENST00000492466 BFSP1Q12934 665 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 SV2CQ496J9 727 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 C9orf57Q5W0N0 161 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 CEP135Q66GS9 1140 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 LMBRD2Q68DH5 695 aaPredicted RBP15.8■□□□□ 0.12
SS18L1-205ENST00000492466 ENGASEQ8NFI3 743 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 ASB16Q96NS5 453 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 LRRC3Q9BY71 257 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 MTMR12Q9C0I1 747 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 CRISPLD1Q9H336 500 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 MAFFQ9ULX9 164 aa15.8■□□□□ 0.12
SS18L1-205ENST00000492466 TIMM13Q9Y5L4 95 aaPredicted RBP15.8■□□□□ 0.12
SS18L1-205ENST00000492466 NCANO14594 1321 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 GOLGA6L22H0YM25 854 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 PPEF2O14830 753 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 PRPF40AO75400 957 aaKnown RBP15.79■□□□□ 0.12
SS18L1-205ENST00000492466 NR3C1P04150 777 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 ITGB3P05106 788 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 CPB1P15086 417 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 POLR2BP30876 1174 aaKnown RBP15.79■□□□□ 0.12
SS18L1-205ENST00000492466 TAF6P49848 677 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 TWF1Q12792 350 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 STIM1Q13586 685 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 UBXN2BQ14CS0 331 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 METTL23Q86XA0 190 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 SUMF1Q8NBK3 374 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 ERCC4Q92889 916 aaPredicted RBP15.79■□□□□ 0.12
SS18L1-205ENST00000492466 CCDC127Q96BQ5 260 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 GSDMAQ96QA5 445 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 TSG101Q99816 390 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 HEBP1Q9NRV9 189 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 ITGA11Q9UKX5 1188 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 FRMD4BQ9Y2L6 1034 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 CEP250Q9BV73 2442 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 COL4A2P08572 1712 aa15.79■□□□□ 0.12
SS18L1-205ENST00000492466 PDXKO00764 312 aa15.78■□□□□ 0.12
SS18L1-205ENST00000492466 ZNF197O14709 1029 aa15.78■□□□□ 0.12
SS18L1-205ENST00000492466 OR4Q2P0C623 313 aa15.78■□□□□ 0.12
SS18L1-205ENST00000492466 GJA1P17302 382 aa15.78■□□□□ 0.12
SS18L1-205ENST00000492466 PNPLA4P41247 253 aa15.78■□□□□ 0.12
SS18L1-205ENST00000492466 YWHAHQ04917 246 aaPredicted RBP15.78■□□□□ 0.12
SS18L1-205ENST00000492466 CYP24A1Q07973 514 aa15.78■□□□□ 0.12
SS18L1-205ENST00000492466 ZNF528Q3MIS6 628 aa15.78■□□□□ 0.12
SS18L1-205ENST00000492466 TPRG1Q6ZUI0 275 aa15.78■□□□□ 0.12
SS18L1-205ENST00000492466 PDZD4Q76G19 769 aaPredicted RBP15.78■□□□□ 0.12
SS18L1-205ENST00000492466 SMYD4Q8IYR2 804 aaPredicted RBP15.78■□□□□ 0.12
SS18L1-205ENST00000492466 GUF1Q8N442 669 aaKnown RBP15.78■□□□□ 0.12
SS18L1-205ENST00000492466 CSGALNACT2Q8N6G5 542 aa15.78■□□□□ 0.12
SS18L1-205ENST00000492466 BCO2Q9BYV7 579 aa15.78■□□□□ 0.12
SS18L1-205ENST00000492466 GTPBP4Q9BZE4 634 aaKnown RBP15.78■□□□□ 0.12
SS18L1-205ENST00000492466 DNAJC25Q9H1X3 360 aa15.78■□□□□ 0.12
SS18L1-205ENST00000492466 AGAP1Q9UPQ3 857 aa15.78■□□□□ 0.12
SS18L1-205ENST00000492466 SPTLC1O15269 473 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 PHACTR2O75167 634 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 PAX3P23760 479 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 NR2F2P24468 414 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 WNT7BP56706 349 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 LILRA4P59901 499 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 MYO1EQ12965 1108 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 GPR17Q13304 367 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 GRM2Q14416 872 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 ZNF658Q5TYW1 1059 aaPredicted RBP15.77■□□□□ 0.12
SS18L1-205ENST00000492466 VITQ6UXI7 678 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 TMC8Q8IU68 726 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 WDR49Q8IV35 697 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 C12orf56Q8IXR9 622 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 NELL1Q92832 810 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 DNASE1L2Q92874 299 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 SMARCD2Q92925 531 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 SENP8Q96LD8 212 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 ZNF512Q96ME7 567 aaPredicted RBP15.77■□□□□ 0.12
SS18L1-205ENST00000492466 CGRRF1Q99675 332 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 TRPV4Q9HBA0 871 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 ZFP14Q9HCL3 533 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 TRPV5Q9NQA5 729 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 SPATA6Q9NWH7 488 aaPredicted RBP15.77■□□□□ 0.12
SS18L1-205ENST00000492466 FBXO4Q9UKT5 387 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 DSEQ9UL01 958 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 YIPF1Q9Y548 306 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 PCDHA5Q9Y5H7 936 aa15.77■□□□□ 0.12
SS18L1-205ENST00000492466 ARNTLO00327 626 aa15.76■□□□□ 0.11
SS18L1-205ENST00000492466 RPL13P26373 211 aaKnown RBP15.76■□□□□ 0.11
SS18L1-205ENST00000492466 VIPR2P41587 438 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms