RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 CACTINQ8WUQ7 758 aaKnown RBP9.86□□□□□ -0.83
HDAC3-212ENST00000492407 EXOC4Q96A65 974 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 FAM212AQ96EL1 285 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 ZNF560Q96MR9 790 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 KIF9Q9HAQ2 790 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 ABCB6Q9NP58 842 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 DPP3Q9NY33 737 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 CACNA1IQ9P0X4 2223 aa9.86□□□□□ -0.83
HDAC3-212ENST00000492407 DMXL1Q9Y485 3027 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 DOCK6Q96HP0 2047 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 PATJQ8NI35 1801 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 ANKRD63C9JTQ0 380 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 SPECC1L-ADORA2AF8WAN1 911 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 PPEF2O14830 753 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 KIAA0391O15091 583 aaKnown RBP9.85□□□□□ -0.83
HDAC3-212ENST00000492407 ATG13O75143 517 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 PPP1R37O75864 691 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 NFICP08651 508 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 GARTP22102 1010 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 NMT1P30419 496 aaKnown RBP9.85□□□□□ -0.83
HDAC3-212ENST00000492407 CTHP32929 405 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 TXLNAP40222 546 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 ACOT2P49753 483 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 GUCY2FP51841 1108 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 DHX8Q14562 1220 aaKnown RBP9.85□□□□□ -0.83
HDAC3-212ENST00000492407 ZNF268Q14587 947 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-212ENST00000492407 TAF12Q16514 161 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 ITPRIPL2Q3MIP1 535 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 MGAT5BQ3V5L5 792 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 GPR158Q5T848 1215 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 TMEM86AQ8N2M4 240 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 LRRC52Q8N7C0 313 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 OR10T2Q8NGX3 314 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 LEO1Q8WVC0 666 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-212ENST00000492407 RSPRY1Q96DX4 576 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 CEP295NLQ96MC4 621 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 ACCSQ96QU6 501 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 ACBD6Q9BR61 282 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 ZHX3Q9H4I2 956 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 IL21Q9HBE4 155 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 OLFML3Q9NRN5 406 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 PCDHB5Q9Y5E4 795 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 PCDHB13Q9Y5F0 798 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 SRPRBQ9Y5M8 271 aaKnown RBP9.85□□□□□ -0.83
HDAC3-212ENST00000492407 MIA3Q5JRA6 1907 aa9.85□□□□□ -0.83
HDAC3-212ENST00000492407 CITO14578 2027 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 MED19A0JLT2 244 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-212ENST00000492407 K7ESF4 209 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 CSH1P0DML2 217 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 CSH2P0DML3 217 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 ATF6P18850 670 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 ADSSP30520 456 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 ATXN1P54253 815 aaKnown RBP9.84□□□□□ -0.83
HDAC3-212ENST00000492407 RPL10AP62906 217 aaKnown RBP9.84□□□□□ -0.83
HDAC3-212ENST00000492407 TSPY1Q01534 308 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 SATB1Q01826 763 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 CUL4AQ13619 759 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 CCINQ13939 588 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 SIM2Q14190 667 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-212ENST00000492407 GAS6Q14393 721 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 CSRP2Q16527 193 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 ZC2HC1CQ53FD0 456 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-212ENST00000492407 L1TD1Q5T7N2 865 aaKnown RBP9.84□□□□□ -0.83
HDAC3-212ENST00000492407 CRELD2Q6UXH1 353 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-212ENST00000492407 SV2BQ7L1I2 683 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 WDR5BQ86VZ2 330 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 CMTM8Q8IZV2 173 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 KIAA1958Q8N8K9 716 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 CCDC26Q8TAB7 109 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 NETO1Q8TDF5 533 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 LRRC15Q8TF66 581 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 POMGNT1Q8WZA1 660 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 LOXL4Q96JB6 756 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 MYRFLQ96LU7 910 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 LRRC3BQ96PB8 259 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 TMEM209Q96SK2 561 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 SEPT5Q99719 369 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-212ENST00000492407 FAM83CQ9BQN1 747 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 PYM1Q9BRP8 204 aaKnown RBP9.84□□□□□ -0.83
HDAC3-212ENST00000492407 SLC46A2Q9BY10 475 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 TMEM206Q9H813 350 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 GDAP2Q9NXN4 497 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 UXTQ9UBK9 157 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-212ENST00000492407 CDV3Q9UKY7 258 aaKnown RBP9.84□□□□□ -0.83
HDAC3-212ENST00000492407 TRIP11Q15643 1979 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 COL4A2P08572 1712 aa9.84□□□□□ -0.83
HDAC3-212ENST00000492407 NCANO14594 1321 aa9.83□□□□□ -0.84
HDAC3-212ENST00000492407 SLC38A8A6NNN8 435 aa9.83□□□□□ -0.84
HDAC3-212ENST00000492407 CHURC1-FNTBB4DL54 471 aa9.83□□□□□ -0.84
HDAC3-212ENST00000492407 TRDMT1O14717 391 aaKnown RBP9.83□□□□□ -0.84
HDAC3-212ENST00000492407 HRO43593 1189 aa9.83□□□□□ -0.84
HDAC3-212ENST00000492407 HUS1O60921 280 aa9.83□□□□□ -0.84
HDAC3-212ENST00000492407 AKAP3O75969 853 aa9.83□□□□□ -0.84
HDAC3-212ENST00000492407 F11P03951 625 aa9.83□□□□□ -0.84
HDAC3-212ENST00000492407 FAM163BP0C2L3 166 aa9.83□□□□□ -0.84
HDAC3-212ENST00000492407 HMGA1P17096 107 aaKnown RBP9.83□□□□□ -0.84
HDAC3-212ENST00000492407 PFKLP17858 780 aa9.83□□□□□ -0.84
HDAC3-212ENST00000492407 AVPR1AP37288 418 aa9.83□□□□□ -0.84
HDAC3-212ENST00000492407 LHX1P48742 406 aa9.83□□□□□ -0.84
HDAC3-212ENST00000492407 PDGFRLQ15198 375 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms