RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 NUP210Q8TEM1 1887 aaPredicted RBP26.49■■□□□ 1.83
UPF3A-209ENST00000492270 ATF6P18850 670 aa26.49■■□□□ 1.83
UPF3A-209ENST00000492270 MGAT5BQ3V5L5 792 aa26.49■■□□□ 1.83
UPF3A-209ENST00000492270 MTSS1LQ765P7 747 aa26.49■■□□□ 1.83
UPF3A-209ENST00000492270 DCP1BQ8IZD4 617 aaKnown RBP26.49■■□□□ 1.83
UPF3A-209ENST00000492270 PARD3BQ8TEW8 1205 aa26.49■■□□□ 1.83
UPF3A-209ENST00000492270 TMEM174Q8WUU8 243 aa26.49■■□□□ 1.83
UPF3A-209ENST00000492270 KBTBD7Q8WVZ9 684 aa26.49■■□□□ 1.83
UPF3A-209ENST00000492270 LPIN3Q9BQK8 851 aa26.49■■□□□ 1.83
UPF3A-209ENST00000492270 HSFX1Q9UBD0 423 aa26.49■■□□□ 1.83
UPF3A-209ENST00000492270 TRAF3IP3Q9Y228 551 aa26.49■■□□□ 1.83
UPF3A-209ENST00000492270 GREB1Q4ZG55 1949 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 ZNF197O14709 1029 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 GABRDO14764 452 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 CALUO43852 315 aaPredicted RBP26.48■■□□□ 1.83
UPF3A-209ENST00000492270 SRFP11831 508 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 DLG4P78352 724 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 MYL7Q01449 175 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 TSPY1Q01534 308 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 INTS6LQ5JSJ4 861 aaKnown RBP26.48■■□□□ 1.83
UPF3A-209ENST00000492270 CEP135Q66GS9 1140 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 LIMS2Q7Z4I7 341 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 GUF1Q8N442 669 aaKnown RBP26.48■■□□□ 1.83
UPF3A-209ENST00000492270 SPPL2BQ8TCT7 592 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 PKMYT1Q99640 499 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 ACBD6Q9BR61 282 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 ZNF334Q9HCZ1 680 aaPredicted RBP26.48■■□□□ 1.83
UPF3A-209ENST00000492270 GDE1Q9NZC3 331 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 FBXL21Q9UKT6 434 aa26.48■■□□□ 1.83
UPF3A-209ENST00000492270 KIF20AO95235 890 aa26.47■■□□□ 1.83
UPF3A-209ENST00000492270 MYL6P60660 151 aa26.47■■□□□ 1.83
UPF3A-209ENST00000492270 TDRD10Q5VZ19 366 aaKnown RBP26.47■■□□□ 1.83
UPF3A-209ENST00000492270 SHKBP1Q8TBC3 707 aa26.47■■□□□ 1.83
UPF3A-209ENST00000492270 GPR152Q8TDT2 470 aa26.47■■□□□ 1.83
UPF3A-209ENST00000492270 C2orf15Q8WU43 125 aaKnown RBP26.47■■□□□ 1.83
UPF3A-209ENST00000492270 PSMG2Q969U7 264 aa26.47■■□□□ 1.83
UPF3A-209ENST00000492270 CCDC34Q96HJ3 373 aa26.47■■□□□ 1.83
UPF3A-209ENST00000492270 CIZ1Q9ULV3 898 aaPredicted RBP26.47■■□□□ 1.83
UPF3A-209ENST00000492270 MUC6Q6W4X9 2439 aa26.47■■□□□ 1.83
UPF3A-209ENST00000492270 HAPLN1P10915 354 aaPredicted RBP26.46■■□□□ 1.83
UPF3A-209ENST00000492270 SMARCB1Q12824 385 aa26.46■■□□□ 1.83
UPF3A-209ENST00000492270 TEAD2Q15562 447 aa26.46■■□□□ 1.83
UPF3A-209ENST00000492270 DNAJB7Q7Z6W7 309 aaPredicted RBP26.46■■□□□ 1.83
UPF3A-209ENST00000492270 SIX5Q8N196 739 aa26.46■■□□□ 1.83
UPF3A-209ENST00000492270 LEMD2Q8NC56 503 aa26.46■■□□□ 1.83
UPF3A-209ENST00000492270 FAM200AQ8TCP9 573 aa26.46■■□□□ 1.83
UPF3A-209ENST00000492270 ELMO3Q96BJ8 720 aa26.46■■□□□ 1.83
UPF3A-209ENST00000492270 ZSWIM3Q96MP5 696 aa26.46■■□□□ 1.83
UPF3A-209ENST00000492270 MMS19Q96T76 1030 aa26.46■■□□□ 1.83
UPF3A-209ENST00000492270 PI4K2AQ9BTU6 479 aa26.46■■□□□ 1.83
UPF3A-209ENST00000492270 PLA2G2FQ9BZM2 168 aa26.46■■□□□ 1.83
UPF3A-209ENST00000492270 GTF3C4Q9UKN8 822 aa26.46■■□□□ 1.83
UPF3A-209ENST00000492270 CA14Q9ULX7 337 aa26.46■■□□□ 1.83
UPF3A-209ENST00000492270 PCDHB5Q9Y5E4 795 aa26.46■■□□□ 1.83
UPF3A-209ENST00000492270 ZNF638Q14966 1978 aaKnown RBP26.46■■□□□ 1.83
UPF3A-209ENST00000492270 A0A1W2PRU2 124 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 ATP2C2O75185 946 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 GADD45BO75293 160 aaPredicted RBP26.45■■□□□ 1.82
UPF3A-209ENST00000492270 MICAL2O94851 1124 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 FCARP24071 287 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 NR2F2P24468 414 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 LMO2P25791 158 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 LHX1P48742 406 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 TUFMP49411 452 aaKnown RBP26.45■■□□□ 1.82
UPF3A-209ENST00000492270 GPR15P49685 360 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 CLDN10P78369 228 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 BIRC3Q13489 604 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 TRPC3Q13507 836 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 FAM78AQ5JUQ0 283 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 IER5LQ5T953 404 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 DPH6Q7L8W6 267 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 STKLD1Q8NE28 680 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 SPATA18Q8TC71 538 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 GIPC2Q8TF65 315 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 MRPL45Q9BRJ2 306 aaKnown RBP26.45■■□□□ 1.82
UPF3A-209ENST00000492270 XYLT2Q9H1B5 865 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 MFSD1Q9H3U5 465 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 ASB3Q9Y575 518 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 NME7Q9Y5B8 376 aa26.45■■□□□ 1.82
UPF3A-209ENST00000492270 TICRRQ7Z2Z1 1910 aa26.44■■□□□ 1.82
UPF3A-209ENST00000492270 KRBA1A5PL33 1030 aa26.44■■□□□ 1.82
UPF3A-209ENST00000492270 PHACTR2O75167 634 aa26.44■■□□□ 1.82
UPF3A-209ENST00000492270 PSMC1P62191 440 aaKnown RBP26.44■■□□□ 1.82
UPF3A-209ENST00000492270 GPC5P78333 572 aa26.44■■□□□ 1.82
UPF3A-209ENST00000492270 NFE2Q16621 373 aaPredicted RBP26.44■■□□□ 1.82
UPF3A-209ENST00000492270 WDR72Q3MJ13 1102 aa26.44■■□□□ 1.82
UPF3A-209ENST00000492270 ZCWPW2Q504Y3 356 aa26.44■■□□□ 1.82
UPF3A-209ENST00000492270 STXBP5Q5T5C0 1151 aa26.44■■□□□ 1.82
UPF3A-209ENST00000492270 CWF19L1Q69YN2 538 aaKnown RBP26.44■■□□□ 1.82
UPF3A-209ENST00000492270 TANGO2Q6ICL3 276 aa26.44■■□□□ 1.82
UPF3A-209ENST00000492270 SYT15Q9BQS2 421 aa26.44■■□□□ 1.82
UPF3A-209ENST00000492270 FRMD4BQ9Y2L6 1034 aa26.44■■□□□ 1.82
UPF3A-209ENST00000492270 PCDHA5Q9Y5H7 936 aa26.44■■□□□ 1.82
UPF3A-209ENST00000492270 COL4A2P08572 1712 aa26.44■■□□□ 1.82
UPF3A-209ENST00000492270 MYBPHLA2RUH7 354 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 AKAP3O75969 853 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 VNN1O95497 513 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 C4BPAP04003 597 aaKnown RBP26.43■■□□□ 1.82
UPF3A-209ENST00000492270 NPR3P17342 541 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 WARSP23381 471 aaKnown RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms